Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0541 ATGACTTTTCACCAAGACAAGTTTGTTAGATTTCAGGATTGGAATTCAGAAAAGAGTCCAGAGAGCAACTATCCTGCAATTAACATAACACGCCCAGGAAGAATTCGGACCACATTAAGTTCAGTTTCTGATAAGTTTCAAAGGGGCTCGGAATCCAGTTCTGAGAGGATAAAGAGATTTGGAAAATCATTCAAATTGCTTCCAAGTAACAGTTTCCTGTCAGGGAGTTTTAGTTCTAGAAAGAAAATACTTGATCCACAGGGCCCTTTCCTTCAAAAGTGGAATAAGATATTTGTCTTATCATGTCTTATTGCTGTATCACTGGATCCTTTGTTCTTGTATGTCCCCGTGATTAACAATGGCAGGAAATGTCTTTCACTGGACAAGACAATGGAAATTACGGCAACTGTTTTGCGATCTTTCTCTGATATTTTTTATATAATCCACATAATTTTCCAGTTTCATACTGGATTCATTGCTCCCTCTTCCAGAGTATTTGGAAGAGGTGTTTTGGTTGAAGATGCTTGGGCAATAGCAGTGAGGTATCTGACATCATACTTCCTCGTTGACATTCTTGCCGTTCTTCCCCTTCCACAGGTGGTGATTCTAATTATCATTCCAAAGATGAAAGGCTCTGAATCATTGAATACAAAGAACTTGCTGAAATTTGTTGTGTTCTTCCAATATGTGCCGCGGTTTTTACGAATAATTCCATTATATAGAGAAGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCTTGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCAAGTCATGTTATTGGTGCTTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACCTGCTGGCAAGATGCCTGTCGAAGAAATTCAACATGTAACAAGGCAGATCTGTATTGTGATAATCGAGGTTTGAGCACAATTACAACGTTCTTGAATGCTTCTTGCCCAATAGAGCCCGAAAATCCAAACCTCTTTGATTTTGGAATGTTCCTTGATGCCCTTAAATCTGGTGTTGTGGAATCTGAAGATTTCCCAGAAAAGTTCTTCTATTGTTTTTGGTGGGGCCTCAGAAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTATGTTTGGGAAATCTGCTTTGCAATTTTCATTTCCATCGCTGGTTTAGTATTATTTGCATTTCTCATTGGAAATATGCAGACATATTTGCAATCAACAACTATGAGGCTGGAGGAGATGAGAGTGAAAAGGAGAGACGCAGAACAGTGGATGTCACATCGATTACTTCCTGACAGCCTGAGAGAGAGAATTAGACGGCATGAACAGTACAAATGGCAAGAAACCAGAGGTGTCGATGAAGACAATTTGATTAGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGCCATCTTTGTTTGGCTTTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGATGAGCAACTTCTGGATGCAATGTGTGACTGTCTTAAGCCAGTGCTTTACACAGAAAAAAGCTGCATTGTACGCGAAGGAGATCCCGTGGATGAGATGCTCTTCATAATGCGTGGCAAGCTATTGACTATGACAACTAATGGTGGAAGAACAGGCTTCTTTAACTCCGAATACCTCAAGGCTGGTGATTTCTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCCCAGTCCTCATCCAACCTTCCGATCTCAACCAGGACAGTCCAAACCCTTTTAGAAGTGGAGGCCTTCGCTCTAAAAGCTGACGATTTGAAGTTCGTTGCTTCTCAATTCCGGCGCCTTCACAGTAAGCAGCTCCGCCACACATTCAGATTCTACTCGCAACAATGGCGTACATGGGCTGCGTGTTTCATACAAGCAGCCTGGAGGCGCTATACTAAAAAGAAGCTTGAAGAATCTCTCAGGGAAGAGGAGAATAGGTTGCAAGATGCATTGTCCAAGGCGAGTGGTAGCTCGCCGAGTCTCGGTGCCACAATATATGCTTCTAGATTTGCTGCTAATGCACTTAGAGCTTTACGACGAAATAACACAAGGAAGACAAGGGTGCCGGAGAGAATGCCACCCATGCTGCTTCAGAAGCCTGCTGAACCTGATTTTACTTCTGAAGAGCGATAA 2145 0.421 MTFHQDKFVRFQDWNSEKSPESNYPAINITRPGRIRTTLSSVSDKFQRGSESSSERIKRFGKSFKLLPSNSFLSGSFSSRKKILDPQGPFLQKWNKIFVLSCLIAVSLDPLFLYVPVINNGRKCLSLDKTMEITATVLRSFSDIFYIIHIIFQFHTGFIAPSSRVFGRGVLVEDAWAIAVRYLTSYFLVDILAVLPLPQVVILIIIPKMKGSESLNTKNLLKFVVFFQYVPRFLRIIPLYREVTRTSGILTETAWAGAAFNLFLYMLASHVIGAFWYLFSIERETTCWQDACRRNSTCNKADLYCDNRGLSTITTFLNASCPIEPENPNLFDFGMFLDALKSGVVESEDFPEKFFYCFWWGLRNLSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTMRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLISNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDCLKPVLYTEKSCIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPQSSSNLPISTRTVQTLLEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYTKKKLEESLREEENRLQDALSKASGSSPSLGATIYASRFAANALRALRRNNTRKTRVPERMPPMLLQKPAEPDFTSEER* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0541 714 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Lan14g0541 714 SUPERFAMILY Voltage-gated potassium channels 85 407 - -
Lan14g0541 714 Coils Coil 637 657 - -
Lan14g0541 714 Gene3D Helix hairpin bin 412 476 - -
Lan14g0541 714 Pfam Ion transport protein 94 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan14g0541 714 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Lan14g0541 714 MobiDBLite consensus disorder prediction 685 714 - -
Lan14g0541 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 712 - -
Lan14g0541 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 712 - -
Lan14g0541 714 Gene3D Jelly Rolls 483 603 IPR014710 -
Lan14g0541 714 Gene3D - 97 409 - -
Lan14g0541 714 SMART cnmp_10 485 616 IPR000595 -
Lan14g0541 714 Coils Coil 709 714 - -
Lan14g0541 714 CDD CAP_ED 485 616 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0541 Lan-Chr14 11326223 11332656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0541 1 713 Ion Channels AT5G53130 78.382 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0541 K05391 - gmx:100817516 1224.15