Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0536 ATGTATGCTGAGACAGGTCTTTTCTTCCCATACTTACAGAACTTCTCTCCAGAGCTTCATCAACTTGAAGAGTACTGCAAAACCCAGAAATCTAATGTTTCAATGAGTGACCTTGTACAGTCCTCTGCCATGTCAGAGTATGATTTTGCAGCAGAGGGAGATCTGTTCAAAGCACCCGAACCAATCATTGAAGATCCATTCTTGGACCTGGATCACATGAGAGCATCAATCTCAGTTATGTCTCGTGAAGATGACCTCTCGTCACAGGGTCTTCAGTCCACAGATATTGATGTTCTTCAAAAAGAACAGCTTCTAAGCGACATGTTGTATGAGTGTGAAAAGGATCTCTTACAAAAGGCTGCAATTGAATCACCACTTTCCGAGATTCTAGAAATCAAGGTTCCTGCGCTGAACTTAGATGAGTATTCAATTCAAGAAGATAAACCATTTCCTGACACGCCACTACCAAAGAGCGTTAGTTCAGTAAGTTTGAGTTCAATGGACTGGATGCATGGAGCTGCAGTGAAACCTGCTTTCCTTGATTTCTCAGGAATAAATTTCAATTCAGTTTACGGCATGCGAAGATCTTTTAGCGAAGGAGATATAAAGACTCTGGAAAATGGTAATGGTAATATGAACATCGTCCAATCTCCCCGTGAGAGGCCCTTTCTTATTAGCAACTGCACCGGTGAGGAACGTCAAGAAAAACTTTCCAGATACAGGAACAAGAAGTCAAAGAGGAACTTTGGTAGGAAAATCAAGTATGCTTGCAGGAAGGCACTTGCTGACAGTCAACCAAGAATCCGCGGAAGATTTGCAAAGTCCGAAGAATCCGATGCGAAAAGGCAATAA 852 0.4214 MYAETGLFFPYLQNFSPELHQLEEYCKTQKSNVSMSDLVQSSAMSEYDFAAEGDLFKAPEPIIEDPFLDLDHMRASISVMSREDDLSSQGLQSTDIDVLQKEQLLSDMLYECEKDLLQKAAIESPLSEILEIKVPALNLDEYSIQEDKPFPDTPLPKSVSSVSLSSMDWMHGAAVKPAFLDFSGINFNSVYGMRRSFSEGDIKTLENGNGNMNIVQSPRERPFLISNCTGEERQEKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKSEESDAKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0536 283 PANTHER CCT MOTIF FAMILY PROTEIN 26 281 - -
Lan14g0536 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 281 - -
Lan14g0536 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Lan14g0536 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0536 Lan-Chr14 11077441 11082064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0536 205 279 C2C2-CO-like Transcription Factor Family AT5G57660 37.805 7.44e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan14g0536 CCT 1.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0536 - - lang:109327232 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0687 15 15533258 15538523 Lan14g0536 14 11077441 11082064 LSH
Lan14g0536 14 11077441 11082064 Lan3g0808 3 15107285 15111630 LSH