Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0534 ATGAAACTCAAACTCTCTGACCCTGGTGGCTCCTCCTCTTACTCCGAAGTTCATCCAAGACCAACCACCAACAAAAAGATCATATTCCTCTCACTCCTCGCCGTAGTCCTAATCCTCGCCTCCGCAGTCTCCGCCGTTATCATCCTCTCCGTCCGTACTCGAGCTTCAAGGAATGACCAAAATGCCCCCACCCTCCGCAGCAAGCCCACCCAAGCTATTTCTAGAACCTGCAGCAAGACACAATTCCCCACACTGTGCATAAACTATCTACTCGATTTCCCTGGTTCCAAAACGGCGTCGGAGAAGGACCTTATCCACATTTCCATTAACATGACTTTACAACATCTCAGCAAAGCTTTATACTCCTCCGCTTTGCTCTCCTCTTCTATCTCCTCCGTCAACCCTCTCCTCCGCGCCGCCTATGATGACTGCCTTGAACTCCTTGACGACTCCATTGACGCCGTCGCTCGATCTCTCAGTTCCGTCGCCACCACCTCCTCCTCCGTCTCTGGCACCGTCAGGTCTCTAGGCTCCTCCGATGACGTGCTGACGTGGCTGAGTGCCGCACTCACCAATCAGGACACGTGTGCGGAGGGCTTCGCCGACACCAGCGGCGACATTAAGGATCAGATGTCGAACAACCTTAGAGACTTATCTGAACTCGTGAGTAACTGTCTCGCGATATTTTCCTCTGTCGGTGCCGGTGATGACTTTTCAGGAGTGCCAATACAGAATAAGAGAAGATTGATGGCAATGCGAGAAGATAAATTCCCGATATGGTTGAAAAGACGAGATAGGAGATTGTTGGGTTTGCCTGTGTCTGAGATTCAAGCCGATATTATCGTTTCCAATGATGGAAATGGAACTGTGAAGAAAATCTCTGAGGCCATTAAGAAAGCACCGGAGTATAGTAGCCGGCGATTTATTATCTATATAAGGGCAGGAAGATATGAAGAGAACAATCTAAAGGTAGGGAGGAAGAAAACCAATCTGATATTTATAGGGGATGGAAAGGGCAAGACGGTCATTACAGGCGGCAAAAACTTTTTGAATGGCACCACCACATTTCGCACCGCATCCTTCGCTGCTAGTGGTGCTGGTTTCATAGCGAGGGACATAACATTTGAGAACTACGCCGGACCAGAGAAGCACCAAGCAGTGGCCCTCCGTATTGGATCTGATCACTCGGTGATCTACCGCTGCAGCATCATTGGCTACCAGGACACATGCTATGCCCACTCTAATCGTCAATTCTACCGCGAATGTGACATTTATGGCACAGTCGATTTCGTATTCGGCAATGCTGCGGTGGTTTTCCAAAACTGCAGCCTCAATGCTCGCAAGCCCATGGCCCAACAGAAAAATACAATCACGGCCCAAAACAGAAAGGACCCAAACCAAAACACAGGTATCTCTATCCACGACTGTCAAATCAAGCCCACTCCAGATTTGGAAGCAGAAAAGGGTAGCTACCAAACTTATCTGGGCCGTCCATGGAAACTATACTCTAGAACAGTGTACATGATGTCATATATGGGTGATCACATACATCAACGTGGATGGTTGGAATGGAATACAACATTTGCTTTAGACACATTGTATTATGGTGAGTACATGAATTATGGGCCTGGTGCAGCAATTGGGCAGAGGGTAAAGTGGCCCGGGTATCGGGTTATCACATCGACGGTGGAGGCAAGCAGGTTTACGGTGGGCCAATTCATATCGGGCTCAACTTGGTTGCCCTCTACCGGAGTTTCATTTTTGGCTGGGCTATCCACCTGA 1782 0.4888 MKLKLSDPGGSSSYSEVHPRPTTNKKIIFLSLLAVVLILASAVSAVIILSVRTRASRNDQNAPTLRSKPTQAISRTCSKTQFPTLCINYLLDFPGSKTASEKDLIHISINMTLQHLSKALYSSALLSSSISSVNPLLRAAYDDCLELLDDSIDAVARSLSSVATTSSSVSGTVRSLGSSDDVLTWLSAALTNQDTCAEGFADTSGDIKDQMSNNLRDLSELVSNCLAIFSSVGAGDDFSGVPIQNKRRLMAMREDKFPIWLKRRDRRLLGLPVSEIQADIIVSNDGNGTVKKISEAIKKAPEYSSRRFIIYIRAGRYEENNLKVGRKKTNLIFIGDGKGKTVITGGKNFLNGTTTFRTASFAASGAGFIARDITFENYAGPEKHQAVALRIGSDHSVIYRCSIIGYQDTCYAHSNRQFYRECDIYGTVDFVFGNAAVVFQNCSLNARKPMAQQKNTITAQNRKDPNQNTGISIHDCQIKPTPDLEAEKGSYQTYLGRPWKLYSRTVYMMSYMGDHIHQRGWLEWNTTFALDTLYYGEYMNYGPGAAIGQRVKWPGYRVITSTVEASRFTVGQFISGSTWLPSTGVSFLAGLST* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0534 593 Gene3D - 273 591 IPR012334 -
Lan14g0534 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 230 IPR035513 -
Lan14g0534 593 PANTHER PECTINESTERASE 16 591 - -
Lan14g0534 593 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Lan14g0534 593 SUPERFAMILY Pectin lyase-like 276 590 IPR011050 -
Lan14g0534 593 Pfam Plant invertase/pectin methylesterase inhibitor 72 228 IPR006501 GO:0004857
Lan14g0534 593 SMART PMEI_2 68 228 IPR006501 GO:0004857
Lan14g0534 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 230 IPR006501 GO:0004857
Lan14g0534 593 Pfam Pectinesterase 279 576 IPR000070 GO:0030599|GO:0042545
Lan14g0534 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 232 IPR035513 -
Lan14g0534 593 PANTHER PECTINESTERASE 16 591 - -
Lan14g0534 593 CDD PMEI-like_3 77 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0534 Lan-Chr14 11031666 11035903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0534 11 592 Carbohydrate Esterase AT3G49220 66.325 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0534 - - gmx:100776752 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0685 15 15508088 15512007 Lan14g0534 14 11031666 11035903 LSH