LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan14g0533	ATGCCTGTGACAGACTCTAATAATGTGCAAGATTTTGATGATAGCTTCTGTTTCCCCATTGAAGAGATTGTACAATACCCTTTGCCTGGATATGCATCGCCAACTTCAATAAGTTTCAGTCCAGATGATACTTTAATTTCTTATTTATTCAGTCCTGATCAGAGGTTAAACAGGAAGATTTTTTCTTTTGATTTGAAGACCAATAAACAAGAATTGTTATTCAGCCCTCCTGATGGTGGACTTGATGAGAGTAACATTTCTCGGGAAGAAAAGTTGACGAGGGAGAGGCTGAGGGAGTGTGGGTTAGGAGTGACGCGGTATGAATGGGTGAAGAAAAACTCTGAAAGCAAATCGGTCATGGTGCCATTGCCTGCTGGGGTTTATATCCAGGATATTTCCAATTCAAAATTAGAACTCAAGCTTCCAAGTATATCAGGCTCACCCATTATTGATCCACATCTGTCTCCAGATGGATCAATGCTTGCTTATGTAAGAGACTGTGAGTTGCATGTTCTGAATCTCTCGACTAATGATTCAAAGCAGTTGACCAATGGTGCAAAGGAAAGTGGTTCGATTCACGGGCTTGCTGAATATATAGCTCAGGAGGAGATGGATAGGAAAAGTGGATATTGGTGGTCACTAGACAGTAAATATATAGCTTTCACTAAAGTTGATTTTTCTGAAATACCACTATTTAGAATTATGCATCAAGGTAAGTTCTCAGTTGGTTCAGAGGCACAGGAAGACCATCCGTATCCTTTTGCGGGAGCTTCAAATGTTAAAGTATGGCTTGGGGTTGTTTCGGTAGCTGGAGGCTCTGTCGTTTGGGTGGATCTTCTCTGTGGGGGCAGGGAACAACCAAAGAACGGGGCGGAATATTTGGCCAGAGTCAATTGGATGCATGGAAATATTCTTACTGCTCAGATCTTGAACAAGCACCACACTAAAATAAAGGTCCTTAACTTTGATATTAAAACAGGCCAAAGGAAAATTATATTGGTGGAAGAAAACAGCACTTGGATCAGTATACATGACTGTTTCACACCTCTTGATAAAGGAGTAACTAAGTTTTCGGGTGGATTTATCTGGGCTAGTGAGAAAACTGGATTTAGACATCTTTATATTCATGATGCAAATGGTACATGTTTGGGTCCTATCACTGAAGGTGACTGGATGGTTGAGCAAATCGCTGGTGTGAATGAGGCTACAGGTGTAGTTTATTTTACTGGAACCTTAGATGGCCCTCTTGAGTCCAACTTATATCGTACTAAACTTTTCGTTGATGGAAGCCAACCACCACAGGCCCCTTTGAGACTTACCCAAAGCAAAGGGAAGCACATTGTAGTCCTTGACCATCATATGCAAAATTTTGTCGATATCCATGATTCCCTTGATTGTCCTCCTAGGGTGTTACTTTGCTCTTTGGATGATGGAAGGATAATCGCGCCTTTGTATGAGCAGTCATTACCAATTCCAAGATTCAAAAGGCTTAAACTTGAGCCTCCGGAGATTCATGAAATACAGGCTAATGACGGCACTACATTGTATGGAGCTCTATATAAGCCCGATGCTTCAAGATTTGGACCTCCACCTTACAAAACTATGATCAATGTCTATGGTGGTCCGAGTGTACAACTTGTTTCTGACTCCTGGATTAGTACAGTTGACCTAAGAACGCAATACTTGAGAAACCAAGGCATCTTGGTTTGGAAGTTAGACAACAGAGGAACTTCTAGACGGGGATTGAAGTTTGAAAGCTATTTTAAGCACAAACTCGGTCAAGTTGATGCCGATGATCAGGTAACTGGAGCGGAGTGGCTTATCAAAAAGGGTCTTGCAAAAGCTGGCCACATTGGGTTGTATGGGTGGAGCTATGGTGGGTACCTCTCCGCTATGGCCCTGTCAAGATATCCAGATTTATTCAAGTGTGCCGTGGCCGGTGCCCCTGTTACATCGTGGGATGGATATGATACGTTTTACACCGAGAAGTACATGGGATTGCCGTCTGAAAACCAATCAGGGTATGAAAACGGTTCGGTCATGAACCATGTGCACAAGTTGAAAGGAAAGTTGTTGCTTGTGCATGGCATGATTGATGAGAATGTGCATTTTAGGCACACTGCAAGGCTTATCAATGCACTTGTGGCAGCTGGAAAACCCTATGAGCTGATAATTTTCCCGGATGAGCGCCATATGCCACGACGCCATAGAGATCGAGTTTACATGGAAGAAAGAATATGGGACTTCATAGAGAGGAATTTGTAA	2265	0.4247	MPVTDSNNVQDFDDSFCFPIEEIVQYPLPGYASPTSISFSPDDTLISYLFSPDQRLNRKIFSFDLKTNKQELLFSPPDGGLDESNISREEKLTRERLRECGLGVTRYEWVKKNSESKSVMVPLPAGVYIQDISNSKLELKLPSISGSPIIDPHLSPDGSMLAYVRDCELHVLNLSTNDSKQLTNGAKESGSIHGLAEYIAQEEMDRKSGYWWSLDSKYIAFTKVDFSEIPLFRIMHQGKFSVGSEAQEDHPYPFAGASNVKVWLGVVSVAGGSVVWVDLLCGGREQPKNGAEYLARVNWMHGNILTAQILNKHHTKIKVLNFDIKTGQRKIILVEENSTWISIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYIHDANGTCLGPITEGDWMVEQIAGVNEATGVVYFTGTLDGPLESNLYRTKLFVDGSQPPQAPLRLTQSKGKHIVVLDHHMQNFVDIHDSLDCPPRVLLCSLDDGRIIAPLYEQSLPIPRFKRLKLEPPEIHEIQANDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVSDSWISTVDLRTQYLRNQGILVWKLDNRGTSRRGLKFESYFKHKLGQVDADDQVTGAEWLIKKGLAKAGHIGLYGWSYGGYLSAMALSRYPDLFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQSGYENGSVMNHVHKLKGKLLLVHGMIDENVHFRHTARLINALVAAGKPYELIIFPDERHMPRRHRDRVYMEERIWDFIERNL*	755

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan14g0533	754	Gene3D	alpha/beta hydrolase	503	754	IPR029058	-
	Lan14g0533	754	PANTHER	DIPEPTIDYL-PEPTIDASE 4-RELATED	20	745	-	-
	Lan14g0533	754	SUPERFAMILY	alpha/beta-Hydrolases	501	754	IPR029058	-
	Lan14g0533	754	Gene3D	-	19	494	-	-
	Lan14g0533	754	Pfam	Dipeptidyl peptidase IV (DPP IV) N-terminal region	117	468	IPR002469	GO:0006508
	Lan14g0533	754	Pfam	Prolyl oligopeptidase family	555	754	IPR001375	GO:0006508\|GO:0008236
	Lan14g0533	754	PANTHER	PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED	20	745	-	-
	Lan14g0533	754	SUPERFAMILY	DPP6 N-terminal domain-like	32	488	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan14g0533	Lan-Chr14	11025614	11030179	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan14g0533	467	752	Carbohydrate Esterase	AT5G36210	23.179	1.72e-12	68.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan14g0533	K01278		-	gmx:100777293	1336.24

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan15g0683	15	15491095	15496603	Lan14g0533	14	11025614	11030179	LSH

Showing 1 to 1 of 1 entries