Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0529 ATGGGCACATGGAAGATTATCAGTGAATATGATAAATACCAGCAGCAACATTGCAAGGACAAAGAAGAGAAATGGCAACATGAAGCAGCAGTTGTTGTGTCTTTAGAGCATTTTCCTGTAGAGAGTTCATCACCTGATATTACCAATGAAGACAGTACTACTACATACACACCTGTGACTGAAGATAGATATCATGTCATTGCCTTTGCAGAGGCAACCGCCATGGCGGCTGAAGCTGCGGTTGCAGCTGCTCAGGCTGCCGCTAGAGTTGTGAGAATGGCGGGTTATGGAAGGCACACTAAAGAAGAAAGGGCAGCAACACTCATTCAATCTTACTACAGAGGTTACCTTGCTCGACGTGCACTTCGTGCTTTGAAGGGATTAGTGAGATTGCAAGCATTAGTGAGGGGACATAATGTAAGGAAACAAGCACAAATGACAATGAGATGCATGCAAACATTAGTGAGAGTACAAGCAAGAGTAAAAGCTAGAAGACTTCAGTTAACTAAGGAGAATCTACAAAGGACATTGAAGGAGTATAAGCACAGAGAGATTAAGGAACTAGTGCCTTATTATAAGGCTATGAGTCCCATGAAAAAGTTACATGCAAATGGTTGGGACAACAGGCATCAAAGTAGCCATAAGATTCAGAGAAATGATTTGAGGAAACATGAGGCTGCAATGAAAAGGGAGAGAGCTCTTGCATATGCTTTCAATTGCCAGCAACAATGTTTGCAGATAGACCCAAATGGTTATGATATTGAAAGGTATGCAAATGAGCATGAAGCAGCTCAATGGAGTTGGGAGTGGTTGGAACAATGGACATCACAACCAAACCATGTTATGCACTTGGGGGCCCCACATGAGATGACACTAACTACCACAACAACAACAACAGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGTTGCACCTTCAGACTCAACTCACTCCAACATGGGCCTCATGGGCCAAGACTTTCTTGATTCAAGCCCAATGTCTGATAGCTACCACCAGAGACAGTACAGTTCTGGGGTACCTGGTTATATGACCCCAACCCAATCTGCAAAGGCTAAGGTTCGAAACCAAAGCCCGTTAAGGCAACGGGCTTCAGTTGGGCCTCACTGGAAATCATCAACAAGGAGAAACTCTCTTAATGGGATGGGCTATGATTCACCTAGCTATGGTAGAGCTACTGCAGGTTATCAGTTTCCTAAAAGCCCAAGCCCACAAATAAATGGGGTTCAATTCCAATTGAGACAGATTTTGAATGGTAACATGAATATTGGCAATTAG 1305 0.4322 MGTWKIISEYDKYQQQHCKDKEEKWQHEAAVVVSLEHFPVESSSPDITNEDSTTTYTPVTEDRYHVIAFAEATAMAAEAAVAAAQAAARVVRMAGYGRHTKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQTLVRVQARVKARRLQLTKENLQRTLKEYKHREIKELVPYYKAMSPMKKLHANGWDNRHQSSHKIQRNDLRKHEAAMKRERALAYAFNCQQQCLQIDPNGYDIERYANEHEAAQWSWEWLEQWTSQPNHVMHLGAPHEMTLTTTTTTTDDMSEEKTVEMDMVAPSDSTHSNMGLMGQDFLDSSPMSDSYHQRQYSSGVPGYMTPTQSAKAKVRNQSPLRQRASVGPHWKSSTRRNSLNGMGYDSPSYGRATAGYQFPKSPSPQINGVQFQLRQILNGNMNIGN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0529 434 PANTHER IQ-DOMAIN 5-RELATED 22 414 - -
Lan14g0529 434 MobiDBLite consensus disorder prediction 361 393 - -
Lan14g0529 434 Gene3D - 99 150 - -
Lan14g0529 434 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Lan14g0529 434 PANTHER IQ-DOMAIN 21 22 414 - -
Lan14g0529 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 147 IPR027417 -
Lan14g0529 434 Coils Coil 156 183 - -
Lan14g0529 434 Pfam IQ calmodulin-binding motif 129 144 IPR000048 GO:0005515
Lan14g0529 434 Pfam IQ calmodulin-binding motif 103 123 IPR000048 GO:0005515
Lan14g0529 434 SMART iq_5 124 145 IPR000048 GO:0005515
Lan14g0529 434 SMART iq_5 101 123 IPR000048 GO:0005515
Lan14g0529 434 MobiDBLite consensus disorder prediction 361 395 - -
Lan14g0529 434 Pfam Protein of unknown function (DUF4005) 334 389 IPR025064 -
Lan14g0529 434 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0529 Lan-Chr14 10966805 10970260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0529 26 414 IQD Protein Family AT3G49260 47.445 2.44e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0529 - - aprc:113873497 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0678 15 15438254 15443272 Lan14g0529 14 10966805 10970260 LSH
Lan14g0529 14 10966805 10970260 Lan3g0805 3 14990108 14995789 LSH