Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0493 ATGGCTACTACTAATGGTGTGGATCCATGTGCCTCTGAAGCCTTTAGCATTTCAGCCACTTCTGAAGATCAAAAGATGAACCTGAAAGAGAAGAATGCCAAATCTGAACAAGAACAAGCTTCAATCTCTAACACCCCATCACAGCTTTTGGATTTCATGAAGCTTAATTCCAATGGTGATTCGGTTAGTGATTCTAAGGTGGAACTTGATTTATTAAACCAAACAGGTAATAATAACATGGTTGGTTCATCTTCTAGGGTTCATAATAATAATAATAACACTGCTGAAGGCACAGATGAAAACACAAAGAATGAGGCAAAGTCTTTCTCATGCAACTTTTGCAAGAGAGAGTTCTCATCCTCACAAGCTTTGGGAGGACACCAAAACGCGCATAAACAAGAGCGCGCCCTTGCGAAACGACGTCAAGGCCTTGATGCTAGTGGTGGTGGTTTTGGTCACCCTTATTACCCTTCTTATCCAACCCTTTCAACTCATTCCTTTTATGGGTCTTACAATAGGGCACTCGGTATTCGAATGGATTCCATGATTCACAAGCCTTCCTACCCTTCGTGGGCATCACCGAATGGATTCAAGTATGGTGGTAGCCCTTGGTTTAGACAAGGAGGCCAAGAAATGCTGAGTTCTTCAACATCATCACCACTTGATAGGTTAAGAATTGAGGGTTTGCAGCAATTGCAATCACATAATGGTGATAGTGGTGGACTTGGATTTTTGGGAGGAAGTGATGTAAGTTCAAGGCTAGAGGATAATGATGGTAATAATAATTGTAATGTTGGAACACTTTCTCTTTCAAAAAATATTGCTACCACTTCATCAATTCAAGTCATGAACAAACCAATTCAATCAACAGTGTTTGATCCTCCTCCTCCACAAGGAACTTCCAAAGGAGAATCTTCAGATGATCTTGATTTGTCACTTAAGCTTTAG 948 0.4061 MATTNGVDPCASEAFSISATSEDQKMNLKEKNAKSEQEQASISNTPSQLLDFMKLNSNGDSVSDSKVELDLLNQTGNNNMVGSSSRVHNNNNNTAEGTDENTKNEAKSFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGLDASGGGFGHPYYPSYPTLSTHSFYGSYNRALGIRMDSMIHKPSYPSWASPNGFKYGGSPWFRQGGQEMLSSSTSSPLDRLRIEGLQQLQSHNGDSGGLGFLGGSDVSSRLEDNDGNNNCNVGTLSLSKNIATTSSIQVMNKPIQSTVFDPPPPQGTSKGESSDDLDLSLKL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0493 315 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Lan14g0493 315 SUPERFAMILY beta-beta-alpha zinc fingers 106 136 IPR036236 -
Lan14g0493 315 MobiDBLite consensus disorder prediction 285 306 - -
Lan14g0493 315 MobiDBLite consensus disorder prediction 285 315 - -
Lan14g0493 315 MobiDBLite consensus disorder prediction 1 23 - -
Lan14g0493 315 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 9 315 - -
Lan14g0493 315 Gene3D Classic Zinc Finger 83 147 - -
Lan14g0493 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Lan14g0493 315 PANTHER ZINC FINGER PROTEIN JAGGED 9 315 IPR045320 GO:0003700
Lan14g0493 315 MobiDBLite consensus disorder prediction 122 141 - -
Lan14g0493 315 Coils Coil 18 38 - -
Lan14g0493 315 MobiDBLite consensus disorder prediction 77 103 - -
Lan14g0493 315 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0493 Lan-Chr14 10532327 10533274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0493 91 206 C2H2 Transcription Factor Family AT5G25160 49.167 6.76e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan14g0493 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0493 - - lang:109326376 607.446