Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan14g0491 | ATGGCTCTTCAACATCGCCTGCACCGCCTTTTGCTTGACCCAGATTCAAGTTCAACTGCACCAGGGAATGCAAATAAGACAAGTGAGTCTTTTTCAGGTAACAAAAGATTTGACACCAACATGGTGATTATCTTGGCAGCTTTGCTTTGTGCACTTATATGTGCTCTTGGACTCAACTCAATTATACGTTGCGCTCTAAGGTGTAGCCGCAGGTTCGCATTTGAGACACCAGATGAGGTTGCGGCTCGCTTAACATCGAAAGGACTAAAGAAGAAAGCATTGCATCAGATCCCTATAGCTGTTTATGGTTCAGGTAGTACTAGTATTGCAGCCACAGAGTGTCCAATTTGCCTTGGGGAGTTTATAAATGGAGAAAAAGTTAGAGTGTTACCAAATTGTCACCATGGATTTCATGTAAGATGCATAGATACATGGCTTCTTTCACACTCCTCTTGTCCTACTTGCAGACACTCTTTGCTTGAACATCCAACAATTTCTGATGCTGCAACTGTGGCTGTTTCTGTAGGAACTAGTCATCAAGTGGAAAATTCCTTAGAAGGACATGAACATGAGCCTTTAGATGTAAGTGTGAATGAGATTGATTAA | 606 | 0.4191 | MALQHRLHRLLLDPDSSSTAPGNANKTSESFSGNKRFDTNMVIILAALLCALICALGLNSIIRCALRCSRRFAFETPDEVAARLTSKGLKKKALHQIPIAVYGSGSTSIAATECPICLGEFINGEKVRVLPNCHHGFHVRCIDTWLLSHSSCPTCRHSLLEHPTISDAATVAVSVGTSHQVENSLEGHEHEPLDVSVNEID* | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan14g0491 | 201 | PANTHER | RING-H2 FINGER PROTEIN ATL74 | 8 | 175 | - | - | |
Lan14g0491 | 201 | Pfam | Ring finger domain | 113 | 156 | IPR001841 | - | |
Lan14g0491 | 201 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 156 | IPR001841 | - | |
Lan14g0491 | 201 | SUPERFAMILY | RING/U-box | 113 | 163 | - | - | |
Lan14g0491 | 201 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 8 | 175 | - | - | |
Lan14g0491 | 201 | SMART | ring_2 | 114 | 155 | IPR001841 | - | |
Lan14g0491 | 201 | CDD | RING-H2_PA-TM-RING | 113 | 156 | - | - | |
Lan14g0491 | 201 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 164 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan14g0491 | Lan-Chr14 | 10495047 | 10496716 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan14g0491 | 7 | 164 | C3H Transcription Factor Family | AT3G10910 | 59.763 | 3.59e-63 | 192 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan14g0491 | - | K19040 | gmx:100787273 | 291.582 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan15g0553 | 15 | 12754185 | 12755926 | Lan14g0491 | 14 | 10495047 | 10496716 | LSH | |
Lan15g0539 | 15 | 12521876 | 12522715 | Lan14g0491 | 14 | 10495047 | 10496716 | LSH | |
Lan12g0677 | 12 | 13578051 | 13578855 | Lan14g0491 | 14 | 10495047 | 10496716 | PCT | |
Lan1g1873 | 1 | 33908397 | 33909642 | Lan14g0491 | 14 | 10495047 | 10496716 | PCT | |
Lan1g1572 | 1 | 26597809 | 26598552 | Lan14g0491 | 14 | 10495047 | 10496716 | PCT | |
Lan14g0491 | 14 | 10495047 | 10496716 | Lan12g0677 | 12 | 13578051 | 13578855 | PCT | |
Lan14g0491 | 14 | 10495047 | 10496716 | Lan1g1873 | 1 | 33908397 | 33909642 | PCT | |
Lan14g0491 | 14 | 10495047 | 10496716 | Lan1g1572 | 1 | 26597809 | 26598552 | PCT |