Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0461 ATGCCAACTTGGTGGAGTAAAAAACCATGCAAAAGCACCAAAACCCAACAACAAAACCAACCAAATGAAAACAACACAAGCACTTTTCTTAACTTCATCAACAAGTCATCCATCAAAAAGGTTAAGAAAAACGGTGAAAAACAATTGGGTTTTGATGATGTCACCGGCGCCGCCTTTCTTTCCCGGAATTCTCCTAGAGCTAACAAGGATTTTACTTCACACGGCGCCGCCGCCGATGCAGACGGTGGTGATAAAATAGGACTCCCTTTACCGCGTCCTTCTGTTTCTTCTAACACTGGGAATGATCAAGGTCTTGTTTTTGGATCTGGGTCCTTCTCTGCTGGTTCTAGCGTTAGTTCTTCTGGCTCCTTGGATGATCATTCGATTTCTCAAATTAACGCTACAAGAGGGCAAGTTGACATGAAGTTCAATGTGAGGCCAAAAAGCCCAGGTCCTGGTTCAAGAGGGCCCACCAGCCCTACTTCCCCTCTTCATCCAAGGTTGAATGTTTTGAGTCTTGACTCCCCGACTGGCAGGCAAGAAGATGGAAGGAGTCAATGTCATCCATTGCCTCTTCCCCCAGGATCTCCTACAAGTCCGTCTTCTCTATCGAACACACGAGCAAATGTACAGCAAGAAAACAGTATCTGTAACCGGGGCAAGTGGAAGAAAGGAAAACTTCTAGGACAGGGAACATTTGGGCATGTTTACCAAGGATTCCATAGTGAAAGTGGACAGATGTGCGCAATAAAAGAAGTCAGGGTTATCTGCGATGACCGGTCGTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATACATTTGCTTAGTCAGCTTTCACATCCAAACATTGTTCAGTACTATGGGAGTGACTTGGGAGATGAAGCACTTTCAGTTTATTTGGAATTTGTATCCGGTGGTTCTATTCATAAACTACTTCAGGAATACGGATCCTTTGGGGAGCCAGTTATTCAGAATTATACCAGGCAGATTGTGTCTGGACTTTCTTATCTTCATGGAAGAAATACAGTACATAGAGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGTTGGCAGACTTTGGAATGGCTAAACATATAAATTCCTCTGCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAACGGCTATAGTCTTCCTGTTGATATATGGAGTTTGGGATGCACAATTCTCGAAATGGCAATGTCGAAGCCTCCTTGGAGTCAATATGAAGGGGTAGCTGCGATATTTAAAATTGGTAACAGCAAAGATATGCCCGAAATTCCTGAGCATCTTTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTACAAAGAGATCCATTAGCTCGCCCAACAGCCCAAATGCTACTAGACCACCCCTTTATTCGAGACCAACCAGCAACAAAATCTGTAAATGTCAGCATAACCAGAGATGCTTTCCCTTACATGTTTGATGGAAGCCGGACGCCGCCAGTTTTAGAGCATCATTCCAATTCCAATAGAACAAATAATACTCTAATAAACGGAGACTATGCAACAAAGCAAGTTGTCGCATCTTCACGAGCAGTAAGGAGCCCAAGAGACAACACAAGAATGATCACATCTTTACCTGTGTCTCCCTGCTCAAGTCCATTGCGACAATATGGACCGGCACACAATAGCTGTTTCCTTTCTCCTCCTCATCCTTCATACACAATGATGAGACAAAATAACCTCAATTCATATCCATTAAGATCGAATGCCGCATTCACCCTTGATCCTTGGCAGGAAAGATCTCCTTACAGAGGTCACACCCCATCCAGCGGATCCCCGAGAACGAGACTCATTTGA 1878 0.435 MPTWWSKKPCKSTKTQQQNQPNENNTSTFLNFINKSSIKKVKKNGEKQLGFDDVTGAAFLSRNSPRANKDFTSHGAAADADGGDKIGLPLPRPSVSSNTGNDQGLVFGSGSFSAGSSVSSSGSLDDHSISQINATRGQVDMKFNVRPKSPGPGSRGPTSPTSPLHPRLNVLSLDSPTGRQEDGRSQCHPLPLPPGSPTSPSSLSNTRANVQQENSICNRGKWKKGKLLGQGTFGHVYQGFHSESGQMCAIKEVRVICDDRSSKECLKQLNQEIHLLSQLSHPNIVQYYGSDLGDEALSVYLEFVSGGSIHKLLQEYGSFGEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMAMSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPLARPTAQMLLDHPFIRDQPATKSVNVSITRDAFPYMFDGSRTPPVLEHHSNSNRTNNTLINGDYATKQVVASSRAVRSPRDNTRMITSLPVSPCSSPLRQYGPAHNSCFLSPPHPSYTMMRQNNLNSYPLRSNAAFTLDPWQERSPYRGHTPSSGSPRTRLI* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0461 625 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 606 - -
Lan14g0461 625 ProSitePatterns Protein kinases ATP-binding region signature. 228 251 IPR017441 GO:0005524
Lan14g0461 625 ProSiteProfiles Protein kinase domain profile. 222 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0461 625 MobiDBLite consensus disorder prediction 160 182 - -
Lan14g0461 625 PANTHER MAP KINASE KINASE KINASE 1 606 - -
Lan14g0461 625 Pfam Protein kinase domain 223 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0461 625 SMART serkin_6 222 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0461 625 MobiDBLite consensus disorder prediction 60 103 - -
Lan14g0461 625 MobiDBLite consensus disorder prediction 610 625 - -
Lan14g0461 625 Gene3D Transferase(Phosphotransferase) domain 1 219 499 - -
Lan14g0461 625 CDD STKc_MEKK1_plant 221 478 - -
Lan14g0461 625 SUPERFAMILY Protein kinase-like (PK-like) 220 544 IPR011009 -
Lan14g0461 625 MobiDBLite consensus disorder prediction 1 28 - -
Lan14g0461 625 MobiDBLite consensus disorder prediction 133 210 - -
Lan14g0461 625 MobiDBLite consensus disorder prediction 604 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0461 Lan-Chr14 9906959 9913025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0461 1 543 MAP Kinase Kinase Kinase AT1G53570 55.935 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan14g0461 Pkinase 3.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0461 K04421 - gmx:100813122 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0461 14 9906959 9913025 Lan3g0717 3 13004609 13015567 LSH
Lan12g0689 12 13718236 13723133 Lan14g0461 14 9906959 9913025 PCT
Lan18g0208 18 2063614 2068712 Lan14g0461 14 9906959 9913025 PCT
Lan14g0461 14 9906959 9913025 Lan12g0689 12 13718236 13723133 PCT