Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0458 ATGAATATCCCTTCTCTCACTCGCTGCTCTAATCTTCTGGTTGCTCCTCTCTACTCTACGGCTCCCACCACCACCACCACTGTCAGGTGCAGCAGAGCAGAGAATATTGCAATTGAAGGTTGTAACCTCAATTTCTCATTCACCACTAACCAAGCAAACGCTGTGCCAGTGCCAATTCTTAAGGATTGTTCGCTTCGAATTCCTTCTGGGCAGTTCTGGATGCTTCTTGGTCCCAATGGGTGTGGAAAATCTACCCTCTTGAAAATTTTGGCTGGTCTTTTGAATCCAACTTCAGGAACAGTGTTTGTGAATAAGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTGATGCCTACAGTAGATTCCGATGTTGCATTTGGTCTTGGTAAGTTCAATCTGACTAATGATGAAGTCATATCTCGGGTGTCAAACGCTTTGAATGCTGTAGGCCTTTCTGACTACATGAAGAGATCTGTCCAAACTTTGAGTGGTGGTCAGAAACAGAGGGTAGCCATTGCTGGTGCTCTAGCAGAAGCATGTAAAGTTCTATTGTTGGATGAGCTGACAACATTCTTAGATGAAACTGATCAGGTTGCGGTTCTTAAAGCTGTTAGGAACTCTTTGGATACCTCTACAGAAGTTACAGCATTATGGGTTACCCATCGTTTAGAAGAACTAGAATATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCATGGAGATGCAGCAAGCATAAGGAGTTTCATTGAAGATAAACAATCCATCTATATTAAACAAATTAATTCTTAA 810 0.4222 MNIPSLTRCSNLLVAPLYSTAPTTTTTVRCSRAENIAIEGCNLNFSFTTNQANAVPVPILKDCSLRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVFVNKPKSFVFQNPDHQVVMPTVDSDVAFGLGKFNLTNDEVISRVSNALNAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVAVLKAVRNSLDTSTEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDAASIRSFIEDKQSIYIKQINS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0458 269 Pfam ABC transporter 60 192 IPR003439 GO:0005524
Lan14g0458 269 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 265 IPR003439 GO:0005524
Lan14g0458 269 CDD ABC_cobalt_CbiO_domain1 44 242 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lan14g0458 269 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 29 268 - -
Lan14g0458 269 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524
Lan14g0458 269 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 29 268 - -
Lan14g0458 269 SMART AAA_5 69 242 IPR003593 -
Lan14g0458 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 256 IPR027417 -
Lan14g0458 269 Gene3D - 35 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0458 Lan-Chr14 9871839 9880166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0458 38 268 Calmodulin-binding Proteins AT2G36910 27.600 2.89e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0458 - - gmx:100813654 405.601