Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0409 ATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGAGCTTGGACCAAAGAAGAAGATGAACGCCTCATTAACCACATCAAGATTCATGGTGAAGGCTGTTGGAGATCTCTTCCCAAAGCTGCTGGCTTGCTTAGATGTGGTAAGAGTTGCAGACTCAGATGGATAAATTACCTGAGACCTGATCTCAAGAGAGGAAACTTCAGTGAAGAAGAAGATGAGATTATCATTAACCTCCATAGCTTACTTGGAAACAAATGGTCTCTAATAGCTGCAAGGTTATCTGGAAGAACAGATAATGAAATCAAGAATTATTGGAACACTCACATTAAGAGAAAACTCTATAGTGGTGGAATTGACCCCCAAAACCACCAACCACTCAATGCCTCTGCCGCCGCCACCACCACTCCCACTGCCACCACAGTTCCACCTTCTAATACCGTGGCCACTATAAGCAACAAGAAAAGGAACAATGATAGCATTAGCAACATCAAACATGACACTAGCAACAACAATTTTCAGTTCGTTAATGGTACTGAAGATTCAAATTGCAGCAGTGGCGTTACCATAGAGGAACTAGCCTTTAACCCTCATAATCAACTCAACTTGGACCTTTCTATTGGTCTTTCTACTAATCAACCGAAAGTTTCTTCTTCTACGATTAACCAAGAAAACAAGAACAAGAAGTTGAAACAAGAACCACAAATTTTGTACCAGTTGTACAATGGGAACAAAGTTAATACTACTCAACAAGGCGTGTGTCTTTGTTACGGTCTAGGGTTTCAAAGCAATAACAAAGCATGTAGCTGCAAAGCCATGGGAAGTGCTACAACTACAGTTACTGCTACAATTGCTACCAATAATGATATGTGTAGATTTTACCAACCCATGAGTTTTTAG 906 0.4051 MGRSPCCEKEHTNKGAWTKEEDERLINHIKIHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSEEEDEIIINLHSLLGNKWSLIAARLSGRTDNEIKNYWNTHIKRKLYSGGIDPQNHQPLNASAAATTTPTATTVPPSNTVATISNKKRNNDSISNIKHDTSNNNFQFVNGTEDSNCSSGVTIEELAFNPHNQLNLDLSIGLSTNQPKVSSSTINQENKNKKLKQEPQILYQLYNGNKVNTTQQGVCLCYGLGFQSNNKACSCKAMGSATTTVTATIATNNDMCRFYQPMSF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0409 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan14g0409 301 CDD SANT 69 112 IPR001005 -
Lan14g0409 301 Gene3D - 14 66 - -
Lan14g0409 301 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lan14g0409 301 SMART sant 66 114 IPR001005 -
Lan14g0409 301 SMART sant 13 63 IPR001005 -
Lan14g0409 301 CDD SANT 16 61 IPR001005 -
Lan14g0409 301 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan14g0409 301 Gene3D - 68 139 - -
Lan14g0409 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan14g0409 301 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan14g0409 301 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lan14g0409 301 PANTHER TRANSCRIPTION FACTOR MYB7 1 237 - -
Lan14g0409 301 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan14g0409 301 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0409 Lan-Chr14 9056046 9057824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0409 1 213 MYB Transcription Factor Family AT4G09460 59.624 1.64e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan14g0409 Myb_DNA-binding 3.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0409 K09422 - gmx:778033 388.652