Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0403 ATGCAGAATAAGTCAATCTTACTATCTTCAGAAGCACCTATGGCAGTTGAAAAAACAAATGATCAAGATGCACTCTTTGACTCTTCAGATACTGGGCCTAATGAAGATCCTGAAGAGGCTGAATTGAAGAAGGAAGCATTGAAGGCTGCTCAAGAAGCAGCCTCTAAGCAGAGAACCTTGACTAGTACTTTTGACAGTGAAAGCTTGAGGTTGCGCCAGGCTGGTGAATCTGATTCACTTCCACAGGAAGTTGCAGGAGCAACTAACAATGATTTACAAACTCCCTCAACCATGCCAGCCACATCCACAGTTCAGACGCCAGAATTATTTAAAGGCCATCTAAAAGATTATCAGTTAAAAGGTCTTCAGTGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAGATGGGACTTGGAAAGACCATCCAGGCTATGGCCTTTTTAGCCCATTTAGCGGAGGAGAAAAACATATGGGGGCCTTTTCTGGTTGTTGCACCTGCTTCTGTATTAAATAATTGGAATGAGGAACTTGAGCGTTTCTGCCCTGATCTTAAAAGGCTTCCTTATTAG 585 0.4222 MQNKSILLSSEAPMAVEKTNDQDALFDSSDTGPNEDPEEAELKKEALKAAQEAASKQRTLTSTFDSESLRLRQAGESDSLPQEVAGATNNDLQTPSTMPATSTVQTPELFKGHLKDYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPDLKRLPY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0403 194 MobiDBLite consensus disorder prediction 54 75 - -
Lan14g0403 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 190 IPR027417 -
Lan14g0403 194 MobiDBLite consensus disorder prediction 36 51 - -
Lan14g0403 194 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 126 194 IPR014001 -
Lan14g0403 194 Gene3D - 83 194 IPR038718 -
Lan14g0403 194 MobiDBLite consensus disorder prediction 1 102 - -
Lan14g0403 194 PANTHER CHROMATIN-REMODELING ATPASE INO80 17 194 IPR031047 GO:0005634|GO:0006281|GO:0006338|GO:0006351|GO:0016887|GO:0031011
Lan14g0403 194 PANTHER HELICASE SRCAP-RELATED 17 194 - -
Lan14g0403 194 MobiDBLite consensus disorder prediction 82 102 - -
Lan14g0403 194 Pfam SNF2-related domain 128 191 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0403 Lan-Chr14 8804914 8805912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0403 117 185 RAD5 or RAD16-like Gene Family AT1G05120 36.486 1.18e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lan14g0403 SNF2_N 9.8e-17 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0403 K11665 - lang:109326493 370.163