Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0382 ATGTCAGCAATAGTTTCAGCCCTTACTCAAGTCATTGGTGGCACCAACAATGAACCACTTCACCAACATCAAGACCCTTTACCAGCCATAACACAGAGCCAGCAATCCCAACCAACACAAGTGGATCAAGGGAACACAAGAAGAAGACACTATAGAGGGGTAAGGCAACGACCTTGGGGGAAATGGGCAGCAGAAATTCGAGATCCAAATAAAGCAGCAAGGGTATGGCTTGGAACATTTGACAATGCTGAAGCTGCAGCACTTGCATATGATGAAGCTGCTCTCAGATTCAAAGGAAGCAAAGCAAAACTCAATTTCCCTGAAAGGGTTCAAGGCACAGGTCAATTTGGTACTTACCTTACAAATCGTCAAAATGAACAAGCACCAATTAACCAAGTTGCTCTTGATCCTCATCCACATTTTTCTCAAGAAACTTATTCATATAATGCTTTTCAACATGAACAATTTATGGGAAGTGGAGAGAGTAGTAATAACAACTTTAGTTATGATATGAGTAGTTTGTATGGGAACCAACCCTTTACATCTTCATCTTCTGGACTAACACAGCAGCAGCAGCAGCAAGAGCTTATGAGGTTTTCTCGGCAATATGGTGGTTCTTCTTCTGGTTCTGATCAACTTCCTAGGAATTGGAAGGATGACAAGGATAGAAGACAATGA 678 0.4174 MSAIVSALTQVIGGTNNEPLHQHQDPLPAITQSQQSQPTQVDQGNTRRRHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDNAEAAALAYDEAALRFKGSKAKLNFPERVQGTGQFGTYLTNRQNEQAPINQVALDPHPHFSQETYSYNAFQHEQFMGSGESSNNNFSYDMSSLYGNQPFTSSSSGLTQQQQQQELMRFSRQYGGSSSGSDQLPRNWKDDKDRRQ* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0382 225 MobiDBLite consensus disorder prediction 180 213 - -
Lan14g0382 225 PANTHER DNA-BINDING DOMAIN 1 218 IPR044808 GO:0003700|GO:0009873
Lan14g0382 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF115-LIKE 1 218 - -
Lan14g0382 225 MobiDBLite consensus disorder prediction 15 55 - -
Lan14g0382 225 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 PRINTS Ethylene responsive element binding protein signature 89 109 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Lan14g0382 225 MobiDBLite consensus disorder prediction 15 44 - -
Lan14g0382 225 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Lan14g0382 225 Gene3D AP2/ERF domain 49 110 IPR036955 GO:0003700|GO:0006355
Lan14g0382 225 MobiDBLite consensus disorder prediction 180 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0382 Lan-Chr14 8294190 8296412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0382 1 164 AP2-EREBP Transcription Factor Family AT5G61890 53.801 2.42e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan14g0382 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0382 - - lang:109337253 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0230 18 2444028 2448775 Lan14g0382 14 8294190 8296412 PCT
Lan14g0382 14 8294190 8296412 Lan18g0230 18 2444028 2448775 PCT