Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0352 ATGCACTCTCAAAAAGGAACCAACATGACAAACACTCCACTTTCTCTACTTTTCTTGCTCTTTTCCCTTCTCACACCAACACTCATTTCCTCTTCATCTCTTCAAAACGCTGAGTTCATAGTAGGAGAGGTAAACAGGAAAGTGAATGCCTCTGCTGCTAGGAGAAACTTGGGGTACCTCTCATGTGCAACTGGAAATCCCATTGATGATTGTTGGAGATGTGACCCAAATTGGGAGAATAATAGGCAAAGGTTAGCCGATTGTGCAATTGGGTTTGGCAAGAACGCAATTGGAGGCAGAGATGGTAAGATATACGTGGTAGACGATGCAGAAAATGACGATCCGGTGAACCCTATTCCAGGCACCCTACGCCACGCCGTGATCCAAGATGAGCCATTATGGATCATATTTGCAAGAGACATGGTGATCCAATTGAAAGAAGAGCTAATTATGAACTCATTCAAGACAATTGATGGAAGAGGTGCAAGTGTTCACATTTCGGGTGGTCCATGCATAACAATACAATACGTAACCAATGTTATCATACATGGTATTCATATACATGATTGTAAGCAAGGTGGGAATGCTATGGTGCGGGACTCCCCACGGCACTATGGGTGGAGAACCGTATCGGACGGTGATGGTGTGTCCATCTTTGGAGGAAGTCATGTTTGGGTGGATCATTGTTCATTGTCTAATTGCATTGATGGTTTGATTGATGCGATTCATGGGTCTACGGCTATTACCATATCCAATAATTATATGACTCACCATGATAAGGTTATGTTGTTGGGTCACAATGATGCTTATACCCAAGACAAGAACATGCAAGTCACAATAGCTTTTAACCACTTTGGTGAAGGCCTCGTTCAAAGAATGCCAAGGTGTAGGCTTGGATATTTCCATGTGGTGAATAATGACTACACCCACTGGGAAATGTATGCCATTGGAGGAAGTGCTAACCCAACCATCAATAGCCAAGGCAATAGATTTGTTGCACCCGATGACAGATTCAGCAAAGAGGTGACAAAACATGAAGATGCATCAGAGGATGAATGGAAGGAGTGGAACTGGAGATCAGAAGGGGACATGATGTTAAACGGTGCATTTTTTACATCAACTGGTGCTGGAGCATCCTCTAGTTATGCAAGGGCTTCAAGCTTAGGTGCAAGACCATCTTCCCTTGTTGGTTCAATAACTACAAATGCTGGTGCACTTAATTGCAAGAAAGGTTCACCTTGCTAG 1245 0.4337 MHSQKGTNMTNTPLSLLFLLFSLLTPTLISSSSLQNAEFIVGEVNRKVNASAARRNLGYLSCATGNPIDDCWRCDPNWENNRQRLADCAIGFGKNAIGGRDGKIYVVDDAENDDPVNPIPGTLRHAVIQDEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNVIIHGIHIHDCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCIDGLIDAIHGSTAITISNNYMTHHDKVMLLGHNDAYTQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDASEDEWKEWNWRSEGDMMLNGAFFTSTGAGASSSYARASSLGARPSSLVGSITTNAGALNCKKGSPC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0352 414 Gene3D - 65 407 IPR012334 -
Lan14g0352 414 PANTHER PECTATE LYASE 18-RELATED 9 411 IPR045032 GO:0030570
Lan14g0352 414 Pfam Pectate lyase 150 331 IPR002022 -
Lan14g0352 414 SUPERFAMILY Pectin lyase-like 42 408 IPR011050 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 88 105 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 112 137 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 148 164 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 212 233 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 292 311 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 314 333 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 356 380 IPR018082 -
Lan14g0352 414 PRINTS Pollen allergen Amb family signature 385 408 IPR018082 -
Lan14g0352 414 PANTHER PECTATE LYASE 9 411 - -
Lan14g0352 414 SMART amb_all 140 337 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0352 Lan-Chr14 7342521 7346069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0352 3 414 Polysaccharide Lyase AT5G63180 78.072 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0352 K01728 - gmx:100779940 717.613