Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0327 ATGCATTATTGTGAGCTATATAATAAAAACAATTGTCCTCATTTGATAGATGAAGTGTTTGGAGCATCCGAAAAGGAATTTAGGATGAAGGAGAAAGAGGAAATTGAAAGCAAGAGGATCAATGAAGATCGAGAGCTGAAGGATAATCTTCTGCATAGATATAGCGGCTACATTAGTAACCTGAAGCATGAATTATCCAAAACCAAGAAGAATAAGAAAATGCTATCTGAAGAAGCAAAGCAAATCTTACTTGCATGGTGGAATATTCACTTTAAATGGCCATACCCAACGGATGAGGATAAGGTTGCCCTAGCTGAATGGACTGGTCTGGACCAGAAACAGGTAAACAATTGGTTTATAAACCAAAGGAAGCGTCACTGGAAACAAACACAGGAAATGCAAACAATTTTAGAAGGCTTATATGGGCCTTTCTGA 435 0.377 MHYCELYNKNNCPHLIDEVFGASEKEFRMKEKEEIESKRINEDRELKDNLLHRYSGYISNLKHELSKTKKNKKMLSEEAKQILLAWWNIHFKWPYPTDEDKVALAEWTGLDQKQVNNWFINQRKRHWKQTQEMQTILEGLYGPF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0327 144 Gene3D - 63 136 - -
Lan14g0327 144 SMART HOX_1 68 133 IPR001356 GO:0003677
Lan14g0327 144 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 15 144 - -
Lan14g0327 144 ProSiteProfiles 'Homeobox' domain profile. 66 129 IPR001356 GO:0003677
Lan14g0327 144 SMART ELK_2 45 66 IPR005539 GO:0003677
Lan14g0327 144 ProSitePatterns 'Homeobox' domain signature. 104 127 IPR017970 GO:0000981|GO:0006355
Lan14g0327 144 CDD homeodomain 69 129 IPR001356 GO:0003677
Lan14g0327 144 Pfam ELK domain 45 66 IPR005539 GO:0003677
Lan14g0327 144 Coils Coil 58 78 - -
Lan14g0327 144 SUPERFAMILY Homeodomain-like 68 135 IPR009057 -
Lan14g0327 144 Pfam Homeobox KN domain 86 125 IPR008422 GO:0003677|GO:0006355
Lan14g0327 144 ProSiteProfiles ELK domain profile. 45 65 IPR005539 GO:0003677
Lan14g0327 144 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 15 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0327 Lan-Chr14 6523238 6524561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0327 11 143 Homeobox Transcription Factor Family AT4G08150 54.015 2.71e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan14g0327 Homeobox_KN 2.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0327 - - lang:109326290 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0629 15 14270653 14288784 Lan14g0327 14 6523238 6524561 LSH