Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0312 ATGGATGGTAATAAGGATGACGCGTTGAAATGCTTGGAAATCGGGAAAGAGGCGTTAGAAGCTGGCGATTCATCCCGTGCACTGAAATTTGTGTCGAAAGCTCGCCGTCTGGACCCCACCTTGTCTGTTGACGATCTGTTATCAGCCATAGAGAAGGATGCAGGTGATCAGCTGCCCAAAGCTGCCTCTGCCGAACCATCCGAGCCGGCTTCGCCTTCAAAGCCCTCTGATCAGCCTTCTATCCGGAGAAGGGTTTCGGCGCCTGGATCATCATCATCATCGGCGGCTTCGTATACTGAGGAGCAAATTACAGTTGTCAGGGAGATTAGGAGGAAGAAGAATTATTATGAGATTTTGGGTTTGGAGAAGAGTTGTGCTGTGGAGGATGTGCGAAAGGCGTATAGGAAACTGTCTCTGAAGGTTCATCCAGATAAGAACAAAGCTCCGGGCGCTGAGGAAGCATTTAAGGCTGTGTCAAAGGCTTTTCAATGCCTTAGTAATGAAGAGAGTAAGAGGAAGTATGATGTTTCTGGAGAGGATGAATCGGTTTATGAGAGGCGAGAGACCAGATCGAGGACTAGATCGTTTAATGGATACTATGAGGCTGATGTTGATGCAGAGGAAATATTTAGGAATTTCTTCTTTGGTGGTGGGATGGCTCCTGCAACTAATTTTGGTGGATTCAGTTTTGGAGCAGGGATGGGTCAACGTCCGGCTGAACATGGATCGGGTGGTTTTAATGCTCGGGCTCTAATTCAGTTGCTTCCAGTTCTGTTTATTTTGCTTCTGAACTTTTTGCCATCTTCGGATCCTATTTATACACTTTCTCGGTCCTATCCTTATGAACATCAGTTTACTACGCCCAAGGGTGTTAACTACTATGTTAAGTCAGCCAAATTTGCTCAAGATTACCCGCCTGGTAGCTCTGAACGCACAACAATGGAAGGAAAGGTTGAGAGGGAATACTTCAGCATTCTTCATCAGAATTGTCGGCTTGAGATGCAGCGTCGCCAGTGGGGGTATGTCCGGGAAATGCCACACTGTGACATGCTTCGGAAGTTTGATTCAGTGAGCTGA 1077 0.4689 MDGNKDDALKCLEIGKEALEAGDSSRALKFVSKARRLDPTLSVDDLLSAIEKDAGDQLPKAASAEPSEPASPSKPSDQPSIRRRVSAPGSSSSSAASYTEEQITVVREIRRKKNYYEILGLEKSCAVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDESVYERRETRSRTRSFNGYYEADVDAEEIFRNFFFGGGMAPATNFGGFSFGAGMGQRPAEHGSGGFNARALIQLLPVLFILLLNFLPSSDPIYTLSRSYPYEHQFTTPKGVNYYVKSAKFAQDYPPGSSERTTMEGKVEREYFSILHQNCRLEMQRRQWGYVREMPHCDMLRKFDSVS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0312 358 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Lan14g0312 358 PRINTS DnaJ domain signature 116 134 IPR001623 -
Lan14g0312 358 PRINTS DnaJ domain signature 134 149 IPR001623 -
Lan14g0312 358 PRINTS DnaJ domain signature 150 170 IPR001623 -
Lan14g0312 358 Gene3D DnaJ domain 110 224 IPR036869 -
Lan14g0312 358 MobiDBLite consensus disorder prediction 52 99 - -
Lan14g0312 358 PANTHER AT29763P-RELATED 1 356 - -
Lan14g0312 358 CDD DnaJ 114 167 IPR001623 -
Lan14g0312 358 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Lan14g0312 358 MobiDBLite consensus disorder prediction 69 99 - -
Lan14g0312 358 Pfam Domain of unknown function (DUF1977) 267 338 IPR015399 -
Lan14g0312 358 SMART dnaj_3 113 170 IPR001623 -
Lan14g0312 358 SUPERFAMILY Chaperone J-domain 84 174 IPR036869 -
Lan14g0312 358 PANTHER - 1 356 - -
Lan14g0312 358 Pfam DnaJ domain 114 175 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0312 Lan-Chr14 5980229 5981879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0312 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 2.79e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0312 K09518 - gmx:100793797 509.22