Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0308 ATGGATAAGAAAAGGATTGCAGTTCCTCTTGTGTGTCACGGTCACTCTCGTCCAGTGGTTGATCTCTTTTACAGTCCCGTTACTCCTGATGGATTCTTTCTCATCAGCGCAAGCAAAGATTATAGTCCTATGCTCAGAAACGGAGAGACGGGGGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCAGTATGGAGTTGTTGCTTGGATACGAATGCTTTACGTGCTGCAACTGCTTCTGCTGATTTTTCCACGAAAGTTTGGGATGCATTAACAGGGGATGAGTTACACTCTTTTGAGCACAAGCACATTGTTCGAGCATGTGCTTTTTCTGAGGATACACACCTTTTGCTCACTGGAGGAGTAGAGAAGATTCTCCGTATCTATGATTTGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCCCCTGGTTCAGTCAGAACTGTTGCATGGCTTCATAGTGATCAGACATTATTGAGTTCTTGTACTGATATGGGAGGAGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGAACAGACACTTGAAACCAAGTCATCAGTGACCAGTGCTGAAGTGAGTCAGGATGGTCGATATATTACGACAGCTGATGGTTCTACCATTAAATTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTATGGAATCAGCTTCCTTGGAGCCAAAATATGGGAACAAGTTCGTTGCTGGGGGTGAAGATATGTGGGTTCGTGTGTTTGATTTCCATACCGGCAATGAGATTGCATGCAACAAGGGCCACCATGGTCCGGTACACTGTATCCGTTTCTCTCCTGGAGGAGAATCATATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGTCCATTGACTAATGATGAATCAGAGGCTTTATCCAGAGATGGATCAACTGAAAAGGTTGAGGGGAAGTCGAAAGAAAAAGAAGAGGCAAGGGAGGAATAA 999 0.4464 MDKKRIAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDYSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDLNRPDAPPREVDKSPGSVRTVAWLHSDQTLLSSCTDMGGVRLWDVRSGKIEQTLETKSSVTSAEVSQDGRYITTADGSTIKFWDANHYGLVKSYDMPCTMESASLEPKYGNKFVAGGEDMWVRVFDFHTGNEIACNKGHHGPVHCIRFSPGGESYASGSEDGTIRIWQTGPLTNDESEALSRDGSTEKVEGKSKEKEEAREE* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0308 332 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Lan14g0308 332 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Lan14g0308 332 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 323 - -
Lan14g0308 332 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 132 IPR001680 GO:0005515
Lan14g0308 332 MobiDBLite consensus disorder prediction 299 332 - -
Lan14g0308 332 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Lan14g0308 332 Pfam WD domain, G-beta repeat 182 214 IPR001680 GO:0005515
Lan14g0308 332 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Lan14g0308 332 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Lan14g0308 332 SUPERFAMILY WD40 repeat-like 4 300 IPR036322 GO:0005515
Lan14g0308 332 MobiDBLite consensus disorder prediction 310 332 - -
Lan14g0308 332 Gene3D - 9 326 IPR015943 GO:0005515
Lan14g0308 332 CDD WD40 14 298 - -
Lan14g0308 332 SMART WD40_4 217 256 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 50 89 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 92 130 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 5 47 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 134 174 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 177 214 IPR001680 GO:0005515
Lan14g0308 332 SMART WD40_4 259 298 IPR001680 GO:0005515
Lan14g0308 332 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Lan14g0308 332 Coils Coil 312 332 - -
Lan14g0308 332 PANTHER OS02G0205400 PROTEIN 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0308 Lan-Chr14 5848839 5855395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0308 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 27.914 2.56e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0308 K13137 - gmx:100818422 635.95