Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0275 ATGAATATCAAACCTTCTCATGGACCTATTCATTTCCGTGCTCCTTCAAAGATTTTCTGGCGTACTGTTCGTGGAATGATTCCACACAAAACAAAGCGTGGTGAGCATGCACTTGCTCGTTTGAAGGTTTATGAGGGTATCCCTCCTCCATTTGACAAGCAGAAGAGATTGGTCGTCCCTGATGCTCTGAAGGTCTTGAGGCTCCAGAAGGGACACAAATACTGTCTGTTAGGTCAATTGTCATCTGAGGTTGGATGGAACTACTATGATACCATCAAGGAGCTGGAGAAGAAGAGAAAGGAAAGGTCACAAGTGGTGTATGAGCGAAAGAAGCAGCTCAACAAATTGAGGGTTAAAGCTGAGCAGGTTGCTCAAGAGAAACTTGGTTCCCAACTTCATATTCTTGCTCTTGTTAAGTACTGA 423 0.4397 MNIKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQKRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLHILALVKY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0275 140 TIGRFAM L13_A_E: ribosomal protein uL13 2 88 IPR005755 GO:0003735|GO:0006412|GO:0015934
Lan14g0275 140 Gene3D Ribosomal protein L13 1 88 IPR036899 GO:0003735|GO:0005840|GO:0006412
Lan14g0275 140 PANTHER RIBOSOMAL PROTEIN L13 1 140 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lan14g0275 140 SUPERFAMILY Ribosomal protein L13 2 88 IPR036899 GO:0003735|GO:0005840|GO:0006412
Lan14g0275 140 Pfam Ribosomal protein L13 5 49 IPR005822 GO:0003735|GO:0005840|GO:0006412
Lan14g0275 140 Gene3D - 90 139 - -
Lan14g0275 140 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 1 140 - -
Lan14g0275 140 ProSitePatterns Ribosomal protein L13 signature. 23 46 IPR023563 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0275 Lan-Chr14 4004997 4005529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0275 1 140 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 85.714 4.12e-88 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0275 K02872 - gmx:100499978 256.914