Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0257 ATGGGAAATTGCTTCCGAGCTTATTTTAAGGTTGATAGTTCTGTGAAATCTCAACCCAATTTCGCAGATAATGCTAAAGTTCCTGGTAGAAGCACTCGTTCCTTAGCTCATTTAGGCCCAACTGTACTTGGATACAGTGGTGAAGGTAAACATGGGACTCTCCCTTCTCCAAGATCTGAAGGTGACATAATTTCCTCCCAACATCTAAAAGCCTTCACATTCAACTATCTGAAGTACGCGACGAGAAACTTTCATCCAGATAGTCTAATAGGAGAGGGGGGATTTGGTAATGTCTATAAGGGGCGGATTGATGAGCAACTCCTTGGAGCTTCAAGGCCTGGGTCTGGAATAATGGTTGCTGTGAAGAAGCTTAAACCTGAAGGTTTTCAAGGGCACAAGGAGTGGCTGTCTGAAGTGAATCATCTTGGCCAACTTCATCATCTAAATCTTGTCAAACTATATGGATACTGCCTGGATGGGAATAATCTGCTTCTAGTCTATGAGTACATGCCCAAAGGAAGCTTGGAGAATCATCTATTTTGCAGGGGAGCACAACCACTTTCTTGGGCAACAAGGATCAAAGTTGCCATTGGTGCTGCTCAAGGTCTCACCTTCTTACACGACTCTAAGCAACAAGTTATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGATTTGGAATTTAATGCAAAACTATCAGACTTTGGTCTTGCCAAAGCAGGGCCCACCGGAGATTGTTCACATGTTTCTACTCGTGTCCTGGGCACTCAAGGCTATGCTGCTCCTGAATATATTGCTACAGGTCGGCTGACTACAAAGTGTGATGTCTATAGCTTTGGAGTTGTGCTATTGGAACTACTATCAGGGCGCCGTGCCATTGATAACACAAAACCTGGAGTGGAACAAAACCTGGTAGAATGGTCTAGACCTTATTTGCATGATAGGAGGAAGTTGCTCCGGATTATGGATACCAAGTTAGCAGGGCAGTATCCTAAACGGGCAGCATACACAACTGCAATTCTTGCATTACAATGCACTAGTGAGGCCAAAATCAGACCACAGATGGCTGAGGTTTTAGCTACTTTGGAACTGCTACCAACCATGAGACACTCAATTTCTGGCAGCCCATATAGATCGGAGAGGAAGTCGGCCTTAATCCCCACGAGAGACCGGATGTCCGTCCCTTCCAGTCCCATGACAAAATCCCCTTTGAGACATAATCATCATCGTTATTCTGTAGACAGGAAGTCCATGTCTAGCTTTATTAGTGACATCTCTGTTAGGTCTCCACTGGCATCCCCAACAATATTATCCCCTATGGGGATGAAGACAATTTAA 1341 0.4415 MGNCFRAYFKVDSSVKSQPNFADNAKVPGRSTRSLAHLGPTVLGYSGEGKHGTLPSPRSEGDIISSQHLKAFTFNYLKYATRNFHPDSLIGEGGFGNVYKGRIDEQLLGASRPGSGIMVAVKKLKPEGFQGHKEWLSEVNHLGQLHHLNLVKLYGYCLDGNNLLLVYEYMPKGSLENHLFCRGAQPLSWATRIKVAIGAAQGLTFLHDSKQQVIYRDFKASNILLDLEFNAKLSDFGLAKAGPTGDCSHVSTRVLGTQGYAAPEYIATGRLTTKCDVYSFGVVLLELLSGRRAIDNTKPGVEQNLVEWSRPYLHDRRKLLRIMDTKLAGQYPKRAAYTTAILALQCTSEAKIRPQMAEVLATLELLPTMRHSISGSPYRSERKSALIPTRDRMSVPSSPMTKSPLRHNHHRYSVDRKSMSSFISDISVRSPLASPTILSPMGMKTI* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0257 446 CDD STKc_IRAK 90 366 - -
Lan14g0257 446 MobiDBLite consensus disorder prediction 374 406 - -
Lan14g0257 446 Gene3D Transferase(Phosphotransferase) domain 1 170 377 - -
Lan14g0257 446 PANTHER OS01G0588500 PROTEIN-RELATED 43 401 - -
Lan14g0257 446 ProSitePatterns Protein kinases ATP-binding region signature. 90 123 IPR017441 GO:0005524
Lan14g0257 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lan14g0257 446 ProSiteProfiles Protein kinase domain profile. 84 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0257 446 SUPERFAMILY Protein kinase-like (PK-like) 62 365 IPR011009 -
Lan14g0257 446 Pfam Protein tyrosine and serine/threonine kinase 88 310 IPR001245 GO:0004672|GO:0006468
Lan14g0257 446 Gene3D Phosphorylase Kinase; domain 1 56 169 - -
Lan14g0257 446 PANTHER BNAC02G17010D PROTEIN 43 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0257 Lan-Chr14 3202369 3212164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0257 3 368 Glycoside Hydrolase AT3G07070 46.825 2.28e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan14g0257 PK_Tyr_Ser-Thr 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0257 - - lang:109338813 685.256