Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0253 ATGGATTACTACGTTATACTGAAAGTGAATAGAAACGCCAGCGAAGATGATTTGAAGAAAGCATATAAGAGACTCGCAATGATTTGGCACCCAGACAAAAACATTGTTAACAAAAACGAAGCAGAAGCGAAATTCAAATTAATCTCTGAAGCCTACGATGTTTTAAGCGATCCGCAAAAACGTCAGATCTACGATCTCTACGGTGAGGAAGCGCTCAAGTCTGGACAGTTTCCTGCGCCACCTCAATCCTCTTCTTCTTCGTCGTCATCATCCTCTTCACGTGTTTATCACCAAAGCCGTAACCCTACCCCTACCTCGTTCAGCTTCAATCCCCGTGATGCTGATGACATTTACGCCGAGCTTTTCGGCAGCGATGGTGATGATGTTGGAGGAGGAGGCGGTGGTAGAGGTGGAGGGCGGAGGGATGGGTTTTTTAGGACGTCCAATGGATCCGCCTTCGGGGGAGTTGGAAAGAAGGCTGCCGCTGTGGAGAATGTCTTGCCGTGTAGTTTGGAAGATCTTTACAAAGGTGTCAAGAGAAAAATGAAGATTTCGAGGAATGTCTTTGATGCATTTGGCAAGTGTCATACCGTGGAGGAGATTTTGATTATTGAACTAAAACGTGGCTGGAAGAAAGGAACAAAGATTACTTTCCCTGAGAAAGGTAACCAGGAGCCTGGTGTCATCGCGGCGGATATAACTTTTGTGATAGATGAGAAACCACACACTCTTTACAAAAGGGATGGTAATGATTTGATACTCAACCAGGAGATAACTCTTCTAGAGGCCCTTATAGGTAAAACCTTGGCCATCACCACCTTGGATGGAAGAAGTCTCATGATACCGTTGACAGATATTGTCAAACCAGGTGCCGAGGTTGTTATCCCAAATGAAGGAATGCCGATATCAAAAGAGCTCGGGAGGAAGGGGAATTTAAGAATTAAGTTTGATGTCAAGTACCCTTCAAGGCTAACTATAGAGCAGAAATCTGATCTGAGGAGAGTATTAGGTGGCATCTCATAA 1023 0.4467 MDYYVILKVNRNASEDDLKKAYKRLAMIWHPDKNIVNKNEAEAKFKLISEAYDVLSDPQKRQIYDLYGEEALKSGQFPAPPQSSSSSSSSSSSRVYHQSRNPTPTSFSFNPRDADDIYAELFGSDGDDVGGGGGGRGGGRRDGFFRTSNGSAFGGVGKKAAAVENVLPCSLEDLYKGVKRKMKISRNVFDAFGKCHTVEEILIIELKRGWKKGTKITFPEKGNQEPGVIAADITFVIDEKPHTLYKRDGNDLILNQEITLLEALIGKTLAITTLDGRSLMIPLTDIVKPGAEVVIPNEGMPISKELGRKGNLRIKFDVKYPSRLTIEQKSDLRRVLGGIS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0253 340 Pfam DnaJ C terminal domain 166 321 IPR002939 -
Lan14g0253 340 Gene3D - 161 240 - -
Lan14g0253 340 MobiDBLite consensus disorder prediction 74 111 - -
Lan14g0253 340 Pfam DnaJ domain 2 65 IPR001623 -
Lan14g0253 340 Gene3D DnaJ domain 1 131 IPR036869 -
Lan14g0253 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
Lan14g0253 340 Gene3D - 242 322 - -
Lan14g0253 340 PANTHER BNAA06G20720D PROTEIN 1 339 - -
Lan14g0253 340 CDD DnaJ_C 167 324 - -
Lan14g0253 340 SUPERFAMILY Chaperone J-domain 1 80 IPR036869 -
Lan14g0253 340 PRINTS DnaJ domain signature 4 22 IPR001623 -
Lan14g0253 340 PRINTS DnaJ domain signature 22 37 IPR001623 -
Lan14g0253 340 PRINTS DnaJ domain signature 40 60 IPR001623 -
Lan14g0253 340 PRINTS DnaJ domain signature 60 79 IPR001623 -
Lan14g0253 340 SMART dnaj_3 1 60 IPR001623 -
Lan14g0253 340 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Lan14g0253 340 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Lan14g0253 340 CDD DnaJ 2 57 IPR001623 -
Lan14g0253 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 242 IPR008971 GO:0006457|GO:0051082
Lan14g0253 340 MobiDBLite consensus disorder prediction 77 110 - -
Lan14g0253 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0253 Lan-Chr14 3055030 3061504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0253 3 72 C2H2 Transcription Factor Family AT1G74250 36.486 2.34e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0253 K09510 - gmx:100781572 507.679