Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0230 ATGACGACTATCCCTTCTCCTATTGGTTTGGAGTTCAACATTGATGATCTTTATGAAGAAGCTAAGAAAAGATGGTTGAGGCCAGTAGAAGTACTCTACATTTTGCAGAATCATCATTCTATCAATTTCACCAACCATCCTCCTCAACTCCCAACCAGTGGATCCCTTTTTCTATTTAATAGAAGAGTCCTGCGTTTCTTCCGTAAAGATGGTTATAACTGGCGCAAGAAAAAAGATGGAAGAACTGTCGGAGAAGCACATGAACGCCTTAAGGTTGGAAATGTTGAAATCCTAAATTGTTATTATGCACATGGAGAGGAGAATCGTACTTTCCATAGACGCTCCTACTGGATGTTGGATCCGGCATATGAGCATATTGTTCTCGTGCATTACAGAGAAACAAGTGAGGAGAAATCCAGTTCTGGACCTGTCATGCAATTGACAACAGGTTCCTCTCCCGTGTTTAGGCAGAGTCAAAGTTCATACACTTCTCAGAACCTGGGGAGAACATCCATGATTGTTGATTCATGTGAACCTAATCAGAATTTCTCAAGTCCTGGGTCTGTAGAAGTTTCCTCTGATGTATTCATCAGGAGTAATGGAATGGATAACTTGGGTGGAACAGATGCACAAGCTTTGCGCCAATTGGAGAAGCAGTTAAGTTTGAATGAGAACAGATTTGGAGAAATTTCTCCCTTTTACAGTGAGCATGAAATTGCACATGATTTAAACCCTCAGCAAGTTCAAGGGATGATTTACAAGCAAGATCAGTCAACAGCTTTCTCTGGACCAGATGACCGTGAACAACCTTATGATGGATATAATGGAAAACAAGATGGGAGTGATAAATATTATCATGAATTACTTGACCATGATTCGCCTGATGGAAATGAAAAAGCTCCATCTTGGATGGAGTTACTGGAATCATATAATTCCTCATCCCAGATGAAGTTACCAGAGCAACATGCATATGTTGCATCTAATGAAAATTCACTATCTTCTTTGGGAAGGGTGCTGATTACCAACCAGGAAAACGGTCACTGTCTAAGTTCCAACAGTAATAGTGCTGAAAACTCTGCCTTCTCATTTCCTCAAGAAGATGGTGGAGTCAAATTTCCTACATATTCTTTGGGAGAAACTCAAGGCGCTAATTCTGACTATTGCCCTACATATTTTGGCCAAATACAAATTCAAGAACCTCTTGGTGCAGATTCAAGCTTCACTGTATCACAGAAACGGAAATTCACAATTAAGGCAGTCTCCCCAGAATGGTGTTATGCCATGGATACTCCGAAGGTCATCATTATTGGATCATTTCTCTGTCTTCCTGATGATTCTAGCTGGGCTTGTATGTTTGGTGATATTGAAGTTCATGCTGAGATAATTCAGGATGGTGTAATCAGTTGTGAAGCTCCATCCCACCTTCCTGGAAAGGTCACTCTATGCATTACTTCTGGAAATCGGGAGTCCTGCAGTGAAGTCAGTGAGTTTGAGTTTCGTGATAAGACCAATAGTTGCTCTCGCTGTAATTCATTGGAAAAAGAAGTCAGTAGAAGTCCAGAAAATTTGTTATTGCTTGTTAGATTTGCACAGATGCTCCTTTCTGCTTCAACTCTAAATAATTACAACATAGAGTCTGGAAGTCTTCTTCCAACAAAACAGAAAACTGATGATGATTCGTGGAGCCATATTATAGAGTCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTATTGTTGATTGGCTTCTTGAAGAGCTCCTGAAGGATAGGTTGCAGCTATGGCTTTCTTGCAGATCCAAGGAAAGAGATGAAGGGACAGGCTGCTCTTTGTCCAAGAGAGAGCAGGGGATTCTACACATGGTTTCTGGGTTGGGTTATGAGTGGGCCTTGAACCCTATTCTCAGTTGCGGCATGAATATTAATTTCCGTGACATCAATGGATGGACAGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATTTGCTGGAGCACTTACAGATCCAACTTCAGAAGATCCAACCGGTAAAACTGCTGCATCTATTGCAGCCAGCATTGGCTATAATGGACTGGCAGGTTATCTTTCAGAGGTAGATCTAAGGAGCCATCTGTCATCCCTAACACTGGAAGAGAGTGGGATTTATAAACGTTCTGCTGAGCTTGAACCAGAGTTAACTGTTATTGGTGTCTCTAATGAAACTCTTGCAACCAGTGAGGATCAGGTTTCACTGAAAGATACATTGGCTGCTGCCAGAAATGCAACTCAGGCAGCTGCGCGGATACAGGCCGCTTTTCGTGCACATTCTTTCCGAAAGCGCAGAGAAAGAGAAGCTGCTGCTGCTGCCGCTGCTTTTGATGGATATGATATCGCTGAGTGTAGCATCGATAACATTCCAGTGCTTTACAACGTGTCAAAACTTAGCTTCCAGAACTCGAGTCATTATAATTCAGCTGCCTTATCAATTCAGAAGAAATATCGAGGCTGGAAAGGTCGCAAAGATTTCCTAACATTGCGCCAAAAAGTAGTAAAGATACAGGCTCATGTGAGGGGCTATCAAGTTCGGAAGCATTACACGTTAATAATATGGGCAGTTGGAATATTGGATAAGGTAGTGCTGCGGTGGCGGAGAAAAGGGACTGGTTTGGGAGGCTTTCGACAAGATATAGAGTCAATTGATGGAAGTGATGACGAAGATTTTCTCAAAGTGTTCCGAAAACAGAACGTGCATGTAGCCATTGAAATGGCTGTTTCACGGGTGCTATCCATGGTCCATTCTACAAAGGCTCGTCAGCAATATCATCGCATGCTTGAGATGTATCGTCAAGCTAAGGTTGAACTTGCCAGCACCAGTGAAGAAGCATTGTTATCAACTTCTTCAGAGGATGCTTTCAATACAGAAGATGATTCTTTGGATCAAGTTCCTTCGTTGACACTATACCCTTCCCAACTTTAG 2985 0.4221 MTTIPSPIGLEFNIDDLYEEAKKRWLRPVEVLYILQNHHSINFTNHPPQLPTSGSLFLFNRRVLRFFRKDGYNWRKKKDGRTVGEAHERLKVGNVEILNCYYAHGEENRTFHRRSYWMLDPAYEHIVLVHYRETSEEKSSSGPVMQLTTGSSPVFRQSQSSYTSQNLGRTSMIVDSCEPNQNFSSPGSVEVSSDVFIRSNGMDNLGGTDAQALRQLEKQLSLNENRFGEISPFYSEHEIAHDLNPQQVQGMIYKQDQSTAFSGPDDREQPYDGYNGKQDGSDKYYHELLDHDSPDGNEKAPSWMELLESYNSSSQMKLPEQHAYVASNENSLSSLGRVLITNQENGHCLSSNSNSAENSAFSFPQEDGGVKFPTYSLGETQGANSDYCPTYFGQIQIQEPLGADSSFTVSQKRKFTIKAVSPEWCYAMDTPKVIIIGSFLCLPDDSSWACMFGDIEVHAEIIQDGVISCEAPSHLPGKVTLCITSGNRESCSEVSEFEFRDKTNSCSRCNSLEKEVSRSPENLLLLVRFAQMLLSASTLNNYNIESGSLLPTKQKTDDDSWSHIIESLLVGSGTSSGIVDWLLEELLKDRLQLWLSCRSKERDEGTGCSLSKREQGILHMVSGLGYEWALNPILSCGMNINFRDINGWTALHWAARFGREKMVASLIASGAFAGALTDPTSEDPTGKTAASIAASIGYNGLAGYLSEVDLRSHLSSLTLEESGIYKRSAELEPELTVIGVSNETLATSEDQVSLKDTLAAARNATQAAARIQAAFRAHSFRKRREREAAAAAAAFDGYDIAECSIDNIPVLYNVSKLSFQNSSHYNSAALSIQKKYRGWKGRKDFLTLRQKVVKIQAHVRGYQVRKHYTLIIWAVGILDKVVLRWRRKGTGLGGFRQDIESIDGSDDEDFLKVFRKQNVHVAIEMAVSRVLSMVHSTKARQQYHRMLEMYRQAKVELASTSEEALLSTSSEDAFNTEDDSLDQVPSLTLYPSQL* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0230 994 MobiDBLite consensus disorder prediction 139 159 - -
Lan14g0230 994 ProSiteProfiles CG-1 DNA-binding domain profile. 14 140 IPR005559 GO:0003677
Lan14g0230 994 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 9 984 - -
Lan14g0230 994 SUPERFAMILY E set domains 416 500 IPR014756 -
Lan14g0230 994 ProSiteProfiles IQ motif profile. 825 854 IPR000048 GO:0005515
Lan14g0230 994 Pfam Ankyrin repeats (3 copies) 624 705 IPR002110 GO:0005515
Lan14g0230 994 ProSiteProfiles IQ motif profile. 764 793 IPR000048 GO:0005515
Lan14g0230 994 SMART CG_1_2 17 135 IPR005559 GO:0003677
Lan14g0230 994 Gene3D - 575 711 IPR036770 -
Lan14g0230 994 SMART iq_5 824 846 IPR000048 GO:0005515
Lan14g0230 994 SMART iq_5 847 869 IPR000048 GO:0005515
Lan14g0230 994 SMART iq_5 763 785 IPR000048 GO:0005515
Lan14g0230 994 ProSiteProfiles IQ motif profile. 848 872 IPR000048 GO:0005515
Lan14g0230 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 875 IPR027417 -
Lan14g0230 994 Gene3D Immunoglobulins 410 505 IPR013783 -
Lan14g0230 994 SUPERFAMILY Ankyrin repeat 615 707 IPR036770 -
Lan14g0230 994 Gene3D - 824 871 - -
Lan14g0230 994 Pfam IPT/TIG domain 416 494 IPR002909 -
Lan14g0230 994 Pfam IQ calmodulin-binding motif 850 868 IPR000048 GO:0005515
Lan14g0230 994 Pfam IQ calmodulin-binding motif 827 845 IPR000048 GO:0005515
Lan14g0230 994 ProSiteProfiles Ankyrin repeat region circular profile. 646 671 - -
Lan14g0230 994 ProSiteProfiles Ankyrin repeat profile. 646 678 IPR002110 GO:0005515
Lan14g0230 994 PANTHER CALMODULIN-BINDING PROTEIN 9 984 - -
Lan14g0230 994 Pfam CG-1 domain 20 133 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0230 Lan-Chr14 2579088 2586608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0230 5 987 CAMTA Transcription Factor Family AT1G67310 49.756 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lan14g0230 CG-1 1.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0230 K21596 - gmx:100786880 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0230 14 2579088 2586608 Lan1g1706 1 30821659 30829323 PCT
Lan1g1706 1 30821659 30829323 Lan14g0230 14 2579088 2586608 PCT