Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0215 ATGGAATGGTGCATATTCTCCAACCTCAAAACCCAACCTTTATGGGTCCTCTTCCTCTTCTCTCTTGGTTCCATCACCCTCGTTCGTTTCTCCTTCATTTTCCTCAAATGGGTCTACGTCAATTTCCTCAGACCCTCCAAAAACCTCATGAAGTATGGATCTTGGGCCCTCATCACCGGCCCCACCGACGGCATCGGCAAAGGTTTCGCCTTTGAGCTCGCCCGGAAGGGACTCAACCTCGTCCTTGTCGGGCGCAGCCCGGAGAAGCTTAAGCTTGTCTCTGATTCAATCGCCGCCGAGTTCGGGAAAATTAAGGTTGTCACGGTTGTTGTCGATTTCTCAGGTGATCTAGATTCTGGGATGGAGAAGATTAGAGAAGCGATTGAAGGGATTGATGTTGGGGTATTGGTGAACAATGTTGGGGTTTCTTACCCTTATGCTAGATTCTTCCATGAAGTGGATGATGAGATTTTGAGGAATTTGATTAAGGTGAATATTGAAGGGACTACTAAGGTTACTCAACTTGTGTTGAATGGTATGCTTAAAAGGAAGAAAGGTGCTATTGTTAATATTGGTTCTGGTGCTGCTATTGTTATTCCTTCTGATCCGCTTTATGCTGTTTATGCTGCATCTAAAGCGTACATCGATCAATTTTCGAGATCTCTCTATGTGGAATACAAGAAGAGTGGGATTGACGTGCAGTGTCAGGTTCCATTATATGTAGCAACAAAGATGGCATCAATAAAGAGATCATCATTCTTTGTTCCATCAACAGATGGATATGCCAAAGCCGGTGTGAGATGGATAGGCTATGAACCTCGTTGCACACCGTACTGGCCCCATACCCTTCTCTGGGCCTTGGCATACTCATTGCCAGAGTCTGTCGTTGATGCTTGGCGCCTACGGTTTTGCCTCGGTATTCGAAAGAGGGGGCAGCTCAAGGACTCAAAGAAAAAGGAATGA 963 0.459 MEWCIFSNLKTQPLWVLFLFSLGSITLVRFSFIFLKWVYVNFLRPSKNLMKYGSWALITGPTDGIGKGFAFELARKGLNLVLVGRSPEKLKLVSDSIAAEFGKIKVVTVVVDFSGDLDSGMEKIREAIEGIDVGVLVNNVGVSYPYARFFHEVDDEILRNLIKVNIEGTTKVTQLVLNGMLKRKKGAIVNIGSGAAIVIPSDPLYAVYAASKAYIDQFSRSLYVEYKKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDGYAKAGVRWIGYEPRCTPYWPHTLLWALAYSLPESVVDAWRLRFCLGIRKRGQLKDSKKKE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0215 320 Gene3D - 50 266 - -
Lan14g0215 320 PANTHER BETA-KETOACYL REDUCTASE 1-RELATED 5 319 - -
Lan14g0215 320 Pfam short chain dehydrogenase 55 247 IPR002347 -
Lan14g0215 320 PANTHER RH59310P 5 319 - -
Lan14g0215 320 CDD 17beta-HSD1_like_SDR_c 53 295 - -
Lan14g0215 320 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Lan14g0215 320 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Lan14g0215 320 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Lan14g0215 320 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Lan14g0215 320 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Lan14g0215 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 311 IPR036291 -
Lan14g0215 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Lan14g0215 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Lan14g0215 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Lan14g0215 320 PIRSF 11-beta-HSD1 6 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0215 Lan-Chr14 2485848 2488307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0215 1 320 Lipid Metabolism Gene Families AT1G67730 63.438 4.82e-161 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0215 K10251 - jre:108990665 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0041 15 256749 259240 Lan14g0215 14 2485848 2488307 LSH
Lan12g0567 12 12439344 12443692 Lan14g0215 14 2485848 2488307 PCT
Lan1g1792 1 32622835 32627955 Lan14g0215 14 2485848 2488307 PCT