Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0210 ATGGCAATTCCACTCTCATTTATGTCACTATTCTTCCTACTTCTTTTACCTTCCTTCATTTCCTCTTCCCTACTTCAAGATCCTGAATTAGTAGTCCAAGAAGTACACAAGAGCATTAATGCATCTAGAAGAAACTTAGCATTTCTTTCATGTGTAACTGGTAACCCTATTGATGATTGTTGGAGATGTGATACAAACTGGGAAAAGAACAGAAAGAGGCTAGCAGATTGTGCCATTGGATTTGGTAAACATGCTATTGGTGGCAGAGATGGTAAAATATATGTAGTTACTGACCCTAGTGATGACCCTGTGAGTCCAAAACCAGGTACTTTAAGATATGGTGTGATACAAGAAGAGCCATTATGGATCATATTCAAGCATGACATGGTGATAAAACTCAAACAAGAGCTTATGATGAATTCTTTTAAGACTATTGATGGTAGAGGTGTTAATGTTCATATTGCTGGTGGACCTTGTATTACTATACAATATGTGACTAATATTATAATCCATGGTATTAATATTCATGATTGTAAGCAAGGAGGGAATGCTTATGTGAGAGACTCTCCTATACATTATGGTTGGAGGACTCTTTCTGATGGTGATGGAGTTTCAATCTTTGGTGGAAGTCATGTTTGGGTGGATCATTGTTCTTTGTCGAATTGTCGCGACGGCTTAATCGATGCTATTCATGGATCTACAGCCATTACAATTTCTAATAATTACATGACACATCATAACAAGGTCATGCTTTTGGGTCATAGTGATAGTTATACTAAGGATAAGAATATGCAAGTCACCATTGCCTTCAACCATTTTGGAGAAGGACTAGTGCAGAGAATGCCAAGGTGCAGGCATGGTTACTTTCATGTGGTGAACAATGACTACACACATTGGAGAATGTATGCCATAGGAGGGAGTGCTGCTCCAACTATCAATAGCCAAGGCAATAGATTTCTTGCTCCTAATGACATCACCTTCAAACAGGTGACAAAGAGAGAGAATACACCACAGAACAAATGGGTCAATTGGAATTGGAGATCAAGGGGAGATTTATTGTTAAATGGTGCATTTTTCACACCATCAGGAGTAGCTGCATCTTCAAGCTATGCAAGGGCATCAAGTTTATCAGCAAAACCATCTTCTTTGGTCAGTTCAATCACAGCATCAGCTGGATATCTTAACTGCAGAAAAGGCTCACGCTGCTGA 1209 0.3896 MAIPLSFMSLFFLLLLPSFISSSLLQDPELVVQEVHKSINASRRNLAFLSCVTGNPIDDCWRCDTNWEKNRKRLADCAIGFGKHAIGGRDGKIYVVTDPSDDPVSPKPGTLRYGVIQEEPLWIIFKHDMVIKLKQELMMNSFKTIDGRGVNVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNAYVRDSPIHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSYTKDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWRMYAIGGSAAPTINSQGNRFLAPNDITFKQVTKRENTPQNKWVNWNWRSRGDLLLNGAFFTPSGVAASSSYARASSLSAKPSSLVSSITASAGYLNCRKGSRC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0210 402 SUPERFAMILY Pectin lyase-like 55 393 IPR011050 -
Lan14g0210 402 PANTHER PECTATE LYASE 18-RELATED 6 399 IPR045032 GO:0030570
Lan14g0210 402 Pfam Pectate lyase 134 319 IPR002022 -
Lan14g0210 402 Gene3D - 54 395 IPR012334 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 77 94 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 100 125 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 136 152 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 200 221 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 280 299 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 302 321 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 344 368 IPR018082 -
Lan14g0210 402 PRINTS Pollen allergen Amb family signature 373 396 IPR018082 -
Lan14g0210 402 SMART amb_all 128 325 IPR002022 -
Lan14g0210 402 PANTHER PECTATE LYASE 6 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0210 Lan-Chr14 2456964 2475656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0210 5 402 Polysaccharide Lyase AT5G63180 77.228 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0210 K01728 - gmx:100782388 731.865