Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0205 ATGGGTCTCTCAAATTTCCCTAGTGCTGCTGATGGAGTACTTCCTATTCTTGTAATAAACACAGTTCACTCAGTGATTCTGTTAAAGGACATGTTCAGATTCATGCTTCAAATAATTGGTGTCACAACAACAACAACTTCAACTTCAACTTCCTCTAATATGGAGCAAGAACAATACTATTACTATTCAGATCATGAGATTTCTTCATCAAGGGATAAAAGGGTGTCAATAACTCACTTCAAATCCTTGTGTGATAATAATATAGCTATGTTAGAGTGTTGCTGTTGTGTGTGTCTTTCTAGATTTGAAGCTAATGAAGAGGTTAGTGAATTGTCTTGCAAGCATTTCTTCCATAGAGGTTGTTTAGACAAATGGTTTGATAACAAACACACTACTTGTCCTTTGTGTCGCTCTATAGACTGA 423 0.3593 MGLSNFPSAADGVLPILVINTVHSVILLKDMFRFMLQIIGVTTTTTSTSTSSNMEQEQYYYYSDHEISSSRDKRVSITHFKSLCDNNIAMLECCCCVCLSRFEANEEVSELSCKHFFHRGCLDKWFDNKHTTCPLCRSID* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0205 140 SMART ringv_2 94 137 IPR011016 GO:0008270
Lan14g0205 140 SUPERFAMILY RING/U-box 94 138 - -
Lan14g0205 140 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Lan14g0205 140 SMART ring_2 95 136 IPR001841 -
Lan14g0205 140 Pfam Ring finger domain 95 137 IPR001841 -
Lan14g0205 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 140 IPR013083 -
Lan14g0205 140 PANTHER - 1 139 IPR044249 -
Lan14g0205 140 PANTHER F21J9.24-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0205 Lan-Chr14 2429348 2429991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0205 1 138 C3H Transcription Factor Family AT2G04240 33.333 5.36e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0205 K16285 - gmx:100811790 174.866