Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0198 ATGGCTATTGTACCTTTTGCTACTACTCAATGGGGAATTCGTCCTCATCATATTTTCACCAAATCCACTATCATGGGTAGGGTTGCATCTTCCACTTCAACCCACAATCATCGTCCTTGCAGTGTTACAAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTTTTTCTCGGGATTCCTTGCGTGGACTATATGACATGGGTTCATCTCAAACTTTGCATCGTCGTAGGGGGTCAACGTTGATAGTTAGAGCAGAAGCAGATTACTATTCCGTCCTTGGAGTGTCAAAAAATGCTAGCAAATCGGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAGTTATCATCCAGATGTGAACAAAGAAGCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGACGATGAAAAGCGATCCATATATGACACATATGGAGAGGCTGGACTTAAAGGTTCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATCTGTTTGAGACACTGTTCGAGGGGATGAATGGTGGGATGAACTCCAGAGGTTCTCCGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATTGGAGAGCTGTGTAACTTGCAATGGTTCAGGGGCCAAACCAGGGACGAAGTCATCCAGATGTAGCACTTGTGGTGGTCAAGGTCGGGTTGTCTCGCAAACAAGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAACGGGAGAGGAGAAACTTCAACACCTTGCAATGCGTGCTCTGGTGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTAAAGGTTCCAGCTGGAGTGGATTCTGGTAGCCGATTAAGGGTCCGGAATGAAGGTAATGCTGGGAAGCGTGGGGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGATCCTGTCCTTAAAAGAGATGACACAAACATTTTATACACCTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGACGGCACGGTGGATTTAAAAATCCCATCTGGGACTCAACCTGGTGCGACACTTGTTATGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGGTGATCAACTGGTTCGCGTGCAAGTTGAAATCCCTAAAAGATTGAGCAGTGATGAGAAAAATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACTACCACCAGCAGGAAATAA 1341 0.4489 MAIVPFATTQWGIRPHHIFTKSTIMGRVASSTSTHNHRPCSVTSRVSFMAAPSSSFFSRDSLRGLYDMGSSQTLHRRRGSTLIVRAEADYYSVLGVSKNASKSEIKSAYRKLARSYHPDVNKEAGAEQKFKDISNAYEVLSDDEKRSIYDTYGEAGLKGSAGMGGMGDFNNPFDLFETLFEGMNGGMNSRGSPNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCVTCNGSGAKPGTKSSRCSTCGGQGRVVSQTRTPLGIFQQTMTCSSCNGRGETSTPCNACSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGKRGGPSGDLFVVLEVIPDPVLKRDDTNILYTCKVSYIDAILGTIIKVPTVDGTVDLKIPSGTQPGATLVMARKGIPVLNKSNMRGDQLVRVQVEIPKRLSSDEKNLIEKLADLSKGKTTTSRK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0198 446 Gene3D - 199 334 - -
Lan14g0198 446 ProSiteProfiles dnaJ domain profile. 89 153 IPR001623 -
Lan14g0198 446 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 216 295 IPR036410 -
Lan14g0198 446 Hamap Chaperone protein DnaJ [dnaJ]. 86 442 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan14g0198 446 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 35 446 - -
Lan14g0198 446 Pfam DnaJ domain 89 150 IPR001623 -
Lan14g0198 446 SUPERFAMILY Chaperone J-domain 85 186 IPR036869 -
Lan14g0198 446 CDD DnaJ_C 200 422 - -
Lan14g0198 446 PANTHER BNAA01G34580D PROTEIN 35 446 - -
Lan14g0198 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 197 351 IPR008971 GO:0006457|GO:0051082
Lan14g0198 446 Pfam DnaJ C terminal domain 204 419 IPR002939 -
Lan14g0198 446 Gene3D DnaJ domain 86 192 IPR036869 -
Lan14g0198 446 Gene3D - 229 292 - -
Lan14g0198 446 Gene3D - 339 446 - -
Lan14g0198 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 344 430 IPR008971 GO:0006457|GO:0051082
Lan14g0198 446 CDD DnaJ_zf 229 292 IPR001305 GO:0031072|GO:0051082
Lan14g0198 446 Pfam DnaJ central domain 229 292 IPR001305 GO:0031072|GO:0051082
Lan14g0198 446 TIGRFAM DnaJ_bact: chaperone protein DnaJ 89 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan14g0198 446 PRINTS DnaJ domain signature 91 109 IPR001623 -
Lan14g0198 446 PRINTS DnaJ domain signature 109 124 IPR001623 -
Lan14g0198 446 PRINTS DnaJ domain signature 125 145 IPR001623 -
Lan14g0198 446 PRINTS DnaJ domain signature 145 164 IPR001623 -
Lan14g0198 446 CDD DnaJ 89 142 IPR001623 -
Lan14g0198 446 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Lan14g0198 446 ProSiteProfiles Zinc finger CR-type profile. 216 297 IPR001305 GO:0031072|GO:0051082
Lan14g0198 446 SMART dnaj_3 88 145 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0198 Lan-Chr14 2376227 2380646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0198 90 152 C2H2 Transcription Factor Family AT1G74250 44.928 3.57e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0198 K03686 - gmx:100786143 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0059 15 374877 379193 Lan14g0198 14 2376227 2380646 LSH