Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0189 ATGACATTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGTCGTGGCCATGTTAAGTTCATTCGCTGCTCCAACTGTGGCAAATGCTGTCCCAAGGATAAATCAATTAAGCGATTTGTGGTGAGAAACATTGTTGAGCAGGCTGCAGTTAGAGATGTTCAGGAGGCCTGTGTCTTTGAGCAATACACTCTTCCAAAGCTGTATGTGAAGTTGCATTACTGTGTATCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAAGCGTGATCCCCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCAAGGCCTGGTCAGCCTGGTCAGGCACCCCGTCCTGCTGGGGCCGTAGGCGCTCCTCCTCGTGCTTAA 420 0.531 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVFEQYTLPKLYVKLHYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPGQPGQAPRPAGAVGAPPRA* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0189 139 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Lan14g0189 139 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan14g0189 139 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan14g0189 139 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan14g0189 139 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 - -
Lan14g0189 139 MobiDBLite consensus disorder prediction 90 110 - -
Lan14g0189 139 MobiDBLite consensus disorder prediction 85 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0189 Lan-Chr14 2279715 2291095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0189 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 1.54e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0189 K02976 - gmx:100781822 206.838