Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0185 ATGACTCAACAGCAGAATGTGGTAATGTCTGAAACCAAATCTGAAGTTGTGGCACAAAATAAGTCACTAAGAAGAGGGTACATTTCCATTAGAAGGAGAAGTATTTTGAAGAACCTTGAAATCAATGGAAGAGTTAATGGTTGGATTGAGTCCATGAAAGCTTCTTCTCCAACCCATCATTCTTCTTTGTCTCAAGACCAAACCTCTTGGATTCTTCATCATCCATCAGCATTAGACATGTTTGATCAAATTATGGAAGCATCAAAGGGAAAGCAAATAGTCATGTTTCTAGACTATGATGGCACACTATCACCTATAGTGGAAGACCCTAACCGTGCTTTCATGTCCAATTCGATGAGAAAAACTGTGAGGAAACTTGCAAGGTGTTTTCCAACAGCTATAGTAACTGGCAGATGCAAAGACAAGGTGTACAATTTTGTTCGGTTGGCAGAGTTATACTATGCTGGTAGCCATGGCTTGGATATTAAAGGGCCAACTAGAAGCTCAAAGTACAATAAAGATAGGAAATCAGAGACACTTCTTTTTCAACCTGCCACTCAATTTCTTCCAATGATAGATGGGGTGTACCAACAATTAGTTGATAAGACAAAACCAATTCCCGGAGCTATGGTGGAGAATAACAAGTTTTGTGTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAATGAACTTGCACACCAAGTGAAATCAGTGTTAAAGGACTACCCCAAACTTCGTCTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAGGGGAAAGCCTTGGAATTTTTATTGGAGTCACTTGGATTAGCCAACTGCAATGATGTCTTCCCTATATATATTGGTGATGATCGAAGTGATGAAGACGCTTTCAAGAAATTAAGAGACAGAAGGCAAGGTTTTGGAATTCTTGTTTCGAAATTTCCAAAAGAAACAAGTGCACTTTACTCTTTACAAGAACCCAATGAGGTGATGGACTTTCTTCAACGTTTGGTGGAGTTGAAAAAAGTATAA 1041 0.3881 MTQQQNVVMSETKSEVVAQNKSLRRGYISIRRRSILKNLEINGRVNGWIESMKASSPTHHSSLSQDQTSWILHHPSALDMFDQIMEASKGKQIVMFLDYDGTLSPIVEDPNRAFMSNSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGLDIKGPTRSSKYNKDRKSETLLFQPATQFLPMIDGVYQQLVDKTKPIPGAMVENNKFCVSVHFRCVDEKKWNELAHQVKSVLKDYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCNDVFPIYIGDDRSDEDAFKKLRDRRQGFGILVSKFPKETSALYSLQEPNEVMDFLQRLVELKKV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0185 346 Pfam Trehalose-phosphatase 96 330 IPR003337 GO:0003824|GO:0005992
Lan14g0185 346 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 345 IPR044651 GO:0004805|GO:0005992
Lan14g0185 346 TIGRFAM T6PP: trehalose-phosphatase 91 341 IPR003337 GO:0003824|GO:0005992
Lan14g0185 346 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 95 303 IPR006379 -
Lan14g0185 346 Gene3D - 200 346 IPR023214 -
Lan14g0185 346 Gene3D - 93 181 IPR023214 -
Lan14g0185 346 SUPERFAMILY HAD-like 94 342 IPR036412 -
Lan14g0185 346 CDD HAD_TPP 94 334 - -
Lan14g0185 346 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0185 Lan-Chr14 2244411 2254698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0185 89 340 Trehalose Biosynthesis Gene Families AT1G70290 25.830 1.07e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0185 K01087 - gmx:100794430 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0069 15 438638 442446 Lan14g0185 14 2244411 2254698 LSH
Lan14g0185 14 2244411 2254698 Lan3g0999 3 21754442 21771919 LSH