Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0184 ATGGCAGCATCTATAGATACCTACAATAATGGCAATATGGCACAAGAGTTTATAGAGCCATGTAGTGAAGAGTTGATGAAATCACTTGAATCTTGCATGAAAATTGATTCATATAACTCTTCCTTCTCTATTTCTAATTCTACCCTAAACCCTTCACCATTTTGTTCTTCTTTACCCAATTTATATCCAAACACATATAATTCCATTAAGCTAAACCAACTCACCCCATCTCAAATTCTTCAAATTCAAGCTCAAATCCATATCCAACAACAACAAAAACAAAGGCTAATTCAATTGCAAAATCAAAAACAACACCACTTAAGCTTTCTTAGCCCAAAACATGTTCCAATGAAAAACATAGGTATTCCTAATTCAAAACCAACAAAACTCTACCGTGGAGTGAGACAAAGGCATTGGGGGAAATGGGTAGCTGAGATTAGACTTCCAAAAAATAGAACACGTCTTTGGCTTGGAACCTTTGATACTGCTGAAGAAGCAGCTTTGGCTTATGATAATGCAGCTTTTAAGCTAAGGGGTGATCTTGCAAGGCTTAATTTCCCTCATTTACATCACCATGGTGCTCATGTATATGGTGAATTTGGAAACTTTAAGCCTCTACCTTCTTCAGTTGATGCAAAGCTTCAAGCTATTTGTGAAACATTGGACACAACTAAGCATAGGAAAACCGAAAAAACATGTTCTAATGTTGTGGTTACAAAGCCTAAGGTTAATGCAAAGTTGGAGCTTGATGTGTCACAAATCGACAGTGAAGATTTTAAGGTTGTGATTATTCCAAAGTTGTCATCTATATTTGATGAATCATCATCATCATCATATGATGGTTCTGCTTCTTCACCTGAATCTGATATTACTTTCTTAAATTTCTCTGAATCTAATGAGATTGATAACTTCGGATTGGATTTGGGGAAGTATCCTTCATTGGAAATTGATTGGGAAGCTATTTGA 966 0.3571 MAASIDTYNNGNMAQEFIEPCSEELMKSLESCMKIDSYNSSFSISNSTLNPSPFCSSLPNLYPNTYNSIKLNQLTPSQILQIQAQIHIQQQQKQRLIQLQNQKQHHLSFLSPKHVPMKNIGIPNSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGDLARLNFPHLHHHGAHVYGEFGNFKPLPSSVDAKLQAICETLDTTKHRKTEKTCSNVVVTKPKVNAKLELDVSQIDSEDFKVVIIPKLSSIFDESSSSSYDGSASSPESDITFLNFSESNEIDNFGLDLGKYPSLEIDWEAI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0184 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 1 65 - -
Lan14g0184 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 67 321 - -
Lan14g0184 321 Gene3D AP2/ERF domain 130 188 IPR036955 GO:0003700|GO:0006355
Lan14g0184 321 CDD AP2 129 189 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 Pfam AP2 domain 131 179 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 65 - -
Lan14g0184 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 67 321 - -
Lan14g0184 321 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lan14g0184 321 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0184 Lan-Chr14 2228927 2230141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0184 3 321 AP2-EREBP Transcription Factor Family AT4G39780 46.626 2.99e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan14g0184 AP2 5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0184 K09286 - gmx:100818839 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0070 15 452528 453650 Lan14g0184 14 2228927 2230141 LSH