Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0157 ATGGCATCTAGAACCATTAAAACTCTGATATTGGCTTCTTCGTTATGGCTTTTCCTTCTCTGTGCAGTCATTACATTTTTACAGCTTATAATTGTTGAAAAAGGAACTTCTCAATCTCAACACATTCAATCTGGTACCCTTTTGGAAGAAGATTTGGAGGGAGTGACCCATAAGGTGTATTTTGATGTAGAGATCAATGGAAAATTTGTGGGTCGCATAGTCATGGGCCTTTTTGGGACTACAGTTCCAAAAACTGCAGAAAACTTTCGAGCGCTTTGCACGGGAGAGAAAGGGGTGGGTAGAAGTGGGAAATCTCTTCACTATAAAGGTAGCTCATTCCATAGGATTATACCAAGCTTTATGGTCCAGGGGGGTGATTTCACGCTCGGTGATGGACGAGGTGGAGAATCAATCTATGGTGACAAGTTCGCTGATGAAAACTTCAAGCTGAAGCATACCGGGCCAGGATACTTGTCGATGGCAAATTCTGGTGAAGACACCAATGGCTCCCAGTTTTTCATTACAACAGTAAAAACCAGCTGGCTGGATGGACACCACGTCGTGTTTGGCAAGGTACTTTCCGGGCTGGACGTTTTGCATAAGATCGAAGCCGAAGGAAGTGAAAGCGGCATGCCCAAAAGCAAGGTTGTCATAGTAGACAGTGGGGAATTAACTTCACCGAAGTTAACAGATTGA 696 0.4397 MASRTIKTLILASSLWLFLLCAVITFLQLIIVEKGTSQSQHIQSGTLLEEDLEGVTHKVYFDVEINGKFVGRIVMGLFGTTVPKTAENFRALCTGEKGVGRSGKSLHYKGSSFHRIIPSFMVQGGDFTLGDGRGGESIYGDKFADENFKLKHTGPGYLSMANSGEDTNGSQFFITTVKTSWLDGHHVVFGKVLSGLDVLHKIEAEGSESGMPKSKVVIVDSGELTSPKLTD* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0157 231 CDD cyclophilin_ABH_like 57 222 - -
Lan14g0157 231 SUPERFAMILY Cyclophilin-like 55 226 IPR029000 -
Lan14g0157 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 28 224 - -
Lan14g0157 231 Gene3D - 46 229 IPR029000 -
Lan14g0157 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 61 221 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 92 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Lan14g0157 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 28 224 - -
Lan14g0157 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 108 125 IPR020892 GO:0003755|GO:0006457
Lan14g0157 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 60 223 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0157 Lan-Chr14 1958766 1961889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0157 71 227 U-box Gene Family AT5G67530 42.767 2.78e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0157 K01802 - gmx:100792649 367.466