Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0144 ATGAGAGGACCTAGGAAATGCAGTCATTCAAAGGAAAGGACTGAGTCAAAGTTAGACTCATCGTCGAGATTTGATGCAAACAACACAAAAGGTCGAGCGAAGAAGAATAGGTTGAAATCAAAATTGGATAAACACAGAGTCGGCACAAACACATCAAGGATGGAAGTTAACAATTCTTCCATAGAGGGGCCAATCAAGGACTATTCAAATAAGAATTTGATTATTGGACAAAATCTGTGTAAAACTGATGGAAAATCTTCACAGATGCAGTCTTCAATGATGCTACATGGCAAGAAAGCTCCTCTTTGTTCTAGAAACAAGGGAGAAGATATTGATCGGGAGGCAAAGATCCATAAAATGAAGAGAAGGAGAAAGACGAAAAGGCGAAGGGATAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGAACAAGGAACCTCTTAATCAGAATGAAGCAAGAGCAGAACCTAATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGTTACAAAGAGCAACGAAGCAGATTTTAAAATGTAAACTTAGTATTCGGGATGCCATTCGCCAGCTAGATTCTCTTAGTTCAGTGGGTAGCATTGAAGGTTCTGTCATTGCTCCAGATGGATCTGTTTATCATGAACATATATTCTGTGCAAATTGCAAGTTGCGTGAAGCATTCCCGGAAAATGATATCATACTCTGTGATGGCTCATGCAATCGTGCTTTTCATCAAAGATGCCTCGATCCTCCCTTGGACACTGAAAATATCCCCCCGGAAGACCAGGGCTGGTTTTGCAAGTTTTGTGAATGTAAAATAGAAATACTTGAAGCAACGAATGCACATCTTGGGACTCAATTCTCCTTGGACATTACTTGGCAGGATGTATTCAAGGAAGAGGCTACTTTACCGGATGGTGATAATGCAATACTAAATCAAGAAGAAGAACTGCCATCAGATGATCCCGATGACGATGATTATAATCCAGAGAGGAGGGAAGACAGCCTCAGCACCAACGTAAAAGGAACTGATGATAATGCATCTTTTGATTCAAGCAGTTTCGCCAGTGCGTGGTCTTTGAATAGTGAATGTTCTCTAGTAGATGAAGACATTTTCCGTGAATACTGTTCTGTGAATAGCTGCATAGATTCTGATGATTCTGGGAAAATAGTATGCGGTCATAGGAAGCGTAAAGCAGTTGACTACAAGAAACTTCATGATGAAATGTTTGGGAAGGATGCTCCTCTATTTGAACAAGTCAGCGAAGACGAAGATTGGGGTCCTGGCAAGAGAAAGCGAAGAGAAAAGGAATCCGATGCTGCTAATACACTTATGACACTACATGAAATTGAAAATAAATATTCTAACAATGATTCAATAAGAGAGGGTTCTTCTGACCGACACAACAAAAGACCTTGTTTCAGGATTCCACATGATGCAGTTGAGAAGCTTCGTCAAGTCTTTGCACAGAATGAACTTCCTTCAAGATCCATGAGGGAAGCTCTTTCGAAAGAGTTGGGACTTGACTTTGCGAAGGTTAACAAATGGTTCAAAAATGCACGTTATACAGCACTTAAAACCAGAAAGTGTCAATCTGAAGGAGAACAACTTAAGAGTTTCACTTCTAAGGCCTCAAAGGATTTTAAATCACAAAATGTAGAGAAAGACGAGCTTCTGAGATCAAAGGCCTCCAAAATTTCCGCAGTCCATTGCCAGAAGAATGGTAAAAATGTCGCAGGCAGGGAAAAAATAAAGTCGTGTCGCATTCCTTTACAGGAAAGGCGACAAGAAAAGAGCAACAAGATATTGTCGAAAAACGAAAATGGCGACAAGGACAATGAGTTTAGTGATGATGTTTGCTTGAAGAAACTGTTGAAAGAAAAGAAAAGGAGGGTAAATTCTATATATGAAGGAGATTTTCATGCAGCAGAGTTGGAATTTGAAAGACTTAGCAAAGTGAAGTATAAACTAGATAGTATAAAACAAAGACTAAGTGAAGTTCAAAATTGCAGAGTAAAGGGTTCAGATGAATCATGTTCAAATGAATCTTCTGTTACATATGTACCTATAGCTGAGTTAAGGGAAAAGGTTTAA 2127 0.3963 MRGPRKCSHSKERTESKLDSSSRFDANNTKGRAKKNRLKSKLDKHRVGTNTSRMEVNNSSIEGPIKDYSNKNLIIGQNLCKTDGKSSQMQSSMMLHGKKAPLCSRNKGEDIDREAKIHKMKRRRKTKRRRDNVDLDDASRLQRRTRNLLIRMKQEQNLIDAYSGEGWKGQSREKIRPEKELQRATKQILKCKLSIRDAIRQLDSLSSVGSIEGSVIAPDGSVYHEHIFCANCKLREAFPENDIILCDGSCNRAFHQRCLDPPLDTENIPPEDQGWFCKFCECKIEILEATNAHLGTQFSLDITWQDVFKEEATLPDGDNAILNQEEELPSDDPDDDDYNPERREDSLSTNVKGTDDNASFDSSSFASAWSLNSECSLVDEDIFREYCSVNSCIDSDDSGKIVCGHRKRKAVDYKKLHDEMFGKDAPLFEQVSEDEDWGPGKRKRREKESDAANTLMTLHEIENKYSNNDSIREGSSDRHNKRPCFRIPHDAVEKLRQVFAQNELPSRSMREALSKELGLDFAKVNKWFKNARYTALKTRKCQSEGEQLKSFTSKASKDFKSQNVEKDELLRSKASKISAVHCQKNGKNVAGREKIKSCRIPLQERRQEKSNKILSKNENGDKDNEFSDDVCLKKLLKEKKRRVNSIYEGDFHAAELEFERLSKVKYKLDSIKQRLSEVQNCRVKGSDESCSNESSVTYVPIAELREKV* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0144 708 Gene3D - 432 532 - -
Lan14g0144 708 MobiDBLite consensus disorder prediction 1 43 - -
Lan14g0144 708 Pfam Homeodomain 489 533 IPR001356 GO:0003677
Lan14g0144 708 SUPERFAMILY FYVE/PHD zinc finger 220 285 IPR011011 -
Lan14g0144 708 SUPERFAMILY Homeodomain-like 480 543 IPR009057 -
Lan14g0144 708 SMART PHD_3 228 281 IPR001965 -
Lan14g0144 708 PANTHER POLYCOMB PROTEIN PCL 4 683 - -
Lan14g0144 708 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 277 IPR013083 -
Lan14g0144 708 ProSitePatterns Zinc finger PHD-type signature. 229 280 IPR019786 -
Lan14g0144 708 ProSiteProfiles 'Homeobox' domain profile. 478 538 IPR001356 GO:0003677
Lan14g0144 708 MobiDBLite consensus disorder prediction 325 339 - -
Lan14g0144 708 CDD homeodomain 481 533 IPR001356 GO:0003677
Lan14g0144 708 Pfam PHD-finger 228 283 IPR019787 -
Lan14g0144 708 ProSiteProfiles Zinc finger PHD-type profile. 226 283 IPR019787 -
Lan14g0144 708 SMART HOX_1 480 542 IPR001356 GO:0003677
Lan14g0144 708 MobiDBLite consensus disorder prediction 315 355 - -
Lan14g0144 708 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 4 683 - -
Lan14g0144 708 CDD PHD_PRHA_like 228 280 IPR045876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0144 Lan-Chr14 1794830 1800797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0144 128 543 Homeobox Transcription Factor Family AT4G29940 57.442 4.36e-152 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Lan14g0144 Homeodomain 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0144 - - gmx:100787118 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0389 1 3070721 3076885 Lan14g0144 14 1794830 1800797 PCT
Lan14g0144 14 1794830 1800797 Lan1g0389 1 3070721 3076885 PCT