Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0141 ATGAACATGGAACATCATAGGACCTTGCAAGAAGCTGCTTCAGCTGGATTAAAAAGCATGGAACATCTCATTCGTCTTCTTTCATCTCAAACCCAAACACAAACACAAACATCTTTTAAAGACAACCACAACAACGTTAACCTCGAGTGCTCCGAAATCACAGATTTCACTGTCTCTAAATTTAAACAAGTCATCAACTTACTTAACCGAACTGGTCACGCACGTTTTCGTCGTGCACCTTCTCGTCGACTCGAACCTAAACCCGAACCCGAAACTCAAATCCAAACCCAACAACTAGGTTTGAATTTAGATTTTTCAAAACCAGATCTTGTTAAAGCAAAGACAAATAATAAAGATGATACTCTTAGTATTTCTACTACCACTTCCTCTTTCATGTCTACTATCACTATCACCGGCGATGGTAGCGTCTCCGACGGTAAAATTGGACCCTTTCTCTCTCCTCCGGCACCGGCTGTTTCTGCCGGTAAGCCACCTCTCTCTTCTTCTCACCGGAAAAGGTGTCATGACGTCAGCATCTCCGGTAATTGCCATTGCTCTAAGAGAAGGAAATCACGTGTGAAACGAACGATTAATGTGCCGGCGATTAGTTCAAAGATCGCCGATATACCGCCGGATGAATACTCGTGGAGGAAGTATGGTCAAAAACCGATCAAGGGTTCACCCTATCCACGTGGATACTACAAATGCAGCACCGTAAGAGGGTGTCCAGCAAGGAAGCACGTGGAGCGAGCACAAAACGATCCCAACATGCTGATTGTGACTTATGAGGGAGAGCACTTGCACGCGCAACCGTGTCCGCCGGGAACCACCGCTGCCGGTGTCAATTTCAGCCTCAAGTCAAGTTAA 867 0.4567 MNMEHHRTLQEAASAGLKSMEHLIRLLSSQTQTQTQTSFKDNHNNVNLECSEITDFTVSKFKQVINLLNRTGHARFRRAPSRRLEPKPEPETQIQTQQLGLNLDFSKPDLVKAKTNNKDDTLSISTTTSSFMSTITITGDGSVSDGKIGPFLSPPAPAVSAGKPPLSSSHRKRCHDVSISGNCHCSKRRKSRVKRTINVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQNDPNMLIVTYEGEHLHAQPCPPGTTAAGVNFSLKSS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0141 288 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0141 288 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 2 276 - -
Lan14g0141 288 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 276 IPR044810 GO:0003700
Lan14g0141 288 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0141 288 Pfam WRKY DNA -binding domain 212 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0141 288 MobiDBLite consensus disorder prediction 154 173 - -
Lan14g0141 288 SUPERFAMILY WRKY DNA-binding domain 208 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan14g0141 288 Pfam Plant zinc cluster domain 172 208 IPR018872 -
Lan14g0141 288 Gene3D WRKY domain 196 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0141 Lan-Chr14 1758943 1760759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0141 3 270 WRKY Transcription Factor Family AT2G24570 54.248 7.34e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan14g0141 WRKY 5.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0141 - - gmx:100127391 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0403 1 3219197 3220249 Lan14g0141 14 1758943 1760759 PCT
Lan14g0141 14 1758943 1760759 Lan1g0403 1 3219197 3220249 PCT