Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0138 ATGGAAGGTGATAAACCATGCACCTTTGGTCTAAGTCTAGGGTTAGGAATTGGAGGGTATGTGCCAAAAAAGGAGAAGCAGAAAGTTCACAAACATGTTCCTTGCATGGACCTAACATTTGACCTTTATCCAAAAGGAGAAGCCATTGATGTGAATCATGATGATCATAAGGTAAAAGAGTTCAATTTGAAGAGAATCAATGATGAAGAATACCAAGATCCAAATTCCAAGAGTGATGATAACATGACCAATAACAAGAATGGTAGCAGAAAGAAACTGAGGCTCACAAAGGAGCAATCAGCTATGCTTGAGAATAGTTTCAATATGCATAACACTCTTAGCCCGGCTCAGAAACATGCACTTGCTGAGAAATTGAATTTAAAGCATAGACAAGTAGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAACAAACAGAAGTAGATTGTGAGTCCTTGAAGAAATGTTGTGAAAAACTAACCAATGAGAACCTAAGGTTGAAGAAGGAATTACAGGAACTATGTGCCCTAAAAGTTAGACTCTCTCAAGTTGCAACCATGACTACATGTTCATCTTGCAAGGAACTATTGAAGCCCAATGAAGGAAACAATGTTGTTATTTGTGATGTGGTCCATAATAACAACAATCACAAATTCCAAAGCAGCATTGAATTATAG 684 0.3772 MEGDKPCTFGLSLGLGIGGYVPKKEKQKVHKHVPCMDLTFDLYPKGEAIDVNHDDHKVKEFNLKRINDEEYQDPNSKSDDNMTNNKNGSRKKLRLTKEQSAMLENSFNMHNTLSPAQKHALAEKLNLKHRQVEVWFQNRRARTKLKQTEVDCESLKKCCEKLTNENLRLKKELQELCALKVRLSQVATMTTCSSCKELLKPNEGNNVVICDVVHNNNNHKFQSSIEL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0138 227 PANTHER - 57 207 - -
Lan14g0138 227 CDD homeodomain 90 147 IPR001356 GO:0003677
Lan14g0138 227 ProSiteProfiles 'Homeobox' domain profile. 86 146 IPR001356 GO:0003677
Lan14g0138 227 Gene3D - 82 152 - -
Lan14g0138 227 Coils Coil 145 179 - -
Lan14g0138 227 MobiDBLite consensus disorder prediction 67 93 - -
Lan14g0138 227 SUPERFAMILY Homeodomain-like 76 147 IPR009057 -
Lan14g0138 227 Pfam Homeodomain 90 144 IPR001356 GO:0003677
Lan14g0138 227 ProSitePatterns 'Homeobox' domain signature. 121 144 IPR017970 GO:0000981|GO:0006355
Lan14g0138 227 SMART halz 146 189 IPR003106 GO:0006355|GO:0043565
Lan14g0138 227 SMART HOX_1 88 150 IPR001356 GO:0003677
Lan14g0138 227 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 57 207 - -
Lan14g0138 227 Pfam Homeobox associated leucine zipper 146 179 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0138 Lan-Chr14 1739648 1741809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0138 78 198 Homeobox Transcription Factor Family AT4G37790 64.844 1.21e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan14g0138 Homeodomain 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0138 K09338 - gmx:100778922 249.21