Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0129 ATGTTTCCGGCGGTTGCGGTGCCGTTTACGGTTGGGAATTTAATCCAGAAGGAGATAACTAGTCTAGAGCTTGTGGCAAGTACAGCAGCAACTTTAATATTAAATCCTGCAATTGAGGATTGTCACTCATACTCTGTTGAAACTGAAAAACAACACATGGATATTGTAGCTGAGATTGTTTCTGAAATGGTTATTCCTTGTAGAGAGGAATCTGCTACATTGAGTAGTAATTGTTCTGAAATTGATTCACCAATTGCCATCAAGGGTAAGTCCAGTTCGAATGAGCCACGCGGCAAGATAGAGCCAGACGAGAATATGGCTTCAGTTGCGAAGGGAAATGGAAGTGGATCAGATGGCTGTGATCCAAAACCAAATTCTGAGCTGATAGAGAAGCAAACATGCAGAACAAGCAGCCAGAATGCTTTGGAACTGAGTGGTAATGGCGCTCGTTATGGTTTCTCGTCAGTTTGTGGAATGAGACCGGAGATGGAAGATGCTATTGCTGTCAAGCCTCAACTTTTTCAAGTCCCTCCACAGACGCTAATGGATGACCATGTTGATGAAAACACAAACTACTCATTGGCCCACTTTTTCGGCGTCTATGATGGACATGGGGGCTGTCAGGTTGCCAATTACTGTCAGGAACATCTTCATTCTGTGTTGGTTAAGGAAATTGAAGCTGTAGAAGCCGAAAAGAACGGGAGAGACAATTGGCAGGACCATTGGAAGAAAGCATTCTTCAATTGCTTTCGTAAAGTAGATGATGATGTTGGAAGAGTTCATGCTAATAGTGGAAACAATAGTGAGGATGAATCTGAGTCTAGTATTGAACTTCTTGCTGAGACTGTTGGCTCCACTGCAGTAGTTGCTGTTTTAACTCGAACCGATATAATAGTTGCAAATTGTGGTGATTCGAGAGCAGTTCTATATCGCGGAAAGGAAGCACTGCCATTGTCTTCTGACCACAAACCAAATCGAGAGGACGAGTGGACACGGATAGAAGCTGCAGGAGGAAAGGTCATACAGTGGAACGGATACCGAGTTCTCGGTGTTTTGGCAATGTCAAGGTCCATAGGTGATCATTACTTGAAGCCATGGATAATTCCAGACCCAGAAGTCATGTTTGTCCACCGAGAGAAAATCGACGAGTGCCTTATTCTAGCCAGTGATGGTTTATGGGACGTAATAACAAATGAAGAAGCCTGTGACATTGCACGAAAGCGAATCTTAATTTGGCACAAGAAGAATGGCAACAATGCATCAACAGGACAAGGCCATGGAGCTGATCCTGCAGCTCAGTATGCTGCAGAGTATCTATCTAAACTTGCTCTACAAAGGGGAAGCAAAGATAATATCTCTATTATTGTTATAGACTTGAAGGCTCAAAGAAAATTGAAGACAAAAGGCATAAATTGA 1416 0.4294 MFPAVAVPFTVGNLIQKEITSLELVASTAATLILNPAIEDCHSYSVETEKQHMDIVAEIVSEMVIPCREESATLSSNCSEIDSPIAIKGKSSSNEPRGKIEPDENMASVAKGNGSGSDGCDPKPNSELIEKQTCRTSSQNALELSGNGARYGFSSVCGMRPEMEDAIAVKPQLFQVPPQTLMDDHVDENTNYSLAHFFGVYDGHGGCQVANYCQEHLHSVLVKEIEAVEAEKNGRDNWQDHWKKAFFNCFRKVDDDVGRVHANSGNNSEDESESSIELLAETVGSTAVVAVLTRTDIIVANCGDSRAVLYRGKEALPLSSDHKPNREDEWTRIEAAGGKVIQWNGYRVLGVLAMSRSIGDHYLKPWIIPDPEVMFVHREKIDECLILASDGLWDVITNEEACDIARKRILIWHKKNGNNASTGQGHGADPAAQYAAEYLSKLALQRGSKDNISIIVIDLKAQRKLKTKGIN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0129 471 ProSiteProfiles PPM-type phosphatase domain profile. 150 459 IPR001932 -
Lan14g0129 471 Gene3D - 139 469 IPR036457 -
Lan14g0129 471 ProSitePatterns PPM-type phosphatase domain signature. 197 205 IPR000222 GO:0043169
Lan14g0129 471 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 80 468 - -
Lan14g0129 471 SUPERFAMILY PP2C-like 147 460 IPR036457 -
Lan14g0129 471 Pfam Protein phosphatase 2C 150 452 IPR001932 -
Lan14g0129 471 PANTHER ALPHABET, ISOFORM E-RELATED 80 468 - -
Lan14g0129 471 CDD PP2Cc 150 459 IPR001932 -
Lan14g0129 471 MobiDBLite consensus disorder prediction 85 123 - -
Lan14g0129 471 SMART PP2C_4 140 457 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0129 Lan-Chr14 1599237 1602080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0129 130 471 PP2C-type Phosphatase Gene Family AT4G26080 57.880 2.01e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0129 K14497 - gmx:100802159 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0160 15 1775698 1777913 Lan14g0129 14 1599237 1602080 LSH
Lan12g0994 12 16656029 16659184 Lan14g0129 14 1599237 1602080 PCT
Lan1g1281 1 22588481 22591453 Lan14g0129 14 1599237 1602080 PCT
Lan14g0129 14 1599237 1602080 Lan12g0994 12 16656029 16659184 PCT
Lan14g0129 14 1599237 1602080 Lan1g1281 1 22588481 22591453 PCT