Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0122 ATGCTTACATGCATACCTCGAACGAAGAAACTCGGTGATGACTCGCTGAGTCATCAGGACGATTCTGATCCAAACAACAATGCAAAAAATAATAACCAAGCTGTTAAGTCAATTACTTCTCAGATAAAGGATATGGCGTTGAAGGCATCAGGGGTATATAAGCATTGTGGAACATGTACAGGACCGAGTCGACTCGGAGTGAGCAACAAGGGCGAGTCATTATCACCGGAGTTGGAATCGGAGCGGTTCCGAAGGTTGTACAGGAGAAACGGGAGCGGAAGCTCGTCTAGGAGGATGTGGGGGAAGGAGTTGGAGGAGAGGTTGAAGGGGATTTCGAGTGGTGAAGGAACGCCGAGCTCCGGCGGTGGTGGAGGAAGTGGAAGAAGGGTGGTGGTGGTGGTTGAAGAGGAAGAGGGTAAGGAATGGGTGGCTCAGGTGGAATCAGGCGTTTTGATCAGTTTTGTGTCGCTTCCGGGTGGCGGGAACCACCTCAAGCGGATACGGTTCAGTAGGGATATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAATTTTGATAAGGTGATGGAACTTTACAATGTTCAAAGGGTTAACCATCAAGCTTTCCCTCTTCCAACTCCACCAAGATCAGAAGATGAGAGTTCAAAGCATGAATCGGTAGAAGACATTCCAGCCACACCACCACTAACCAGGGAGAGACTAGCAATGGGGTACTCTTCCTCAGATTCCTTTGATGTTCAATCAATGCAATCCAGGCACCATAATGACTCAACTGGTATGAACTCAACCCCTAAGGTTTCTACCATTAGTGCTGCCAAGACAGAGATATCTTCAATGGATGCTTCGATAAGAAGTTGCTCTTCTAGAGAAGCCGATTACTCGGAGGATATATCGATCAGTAATGTTAGTGATATGGAGACTGAATGGGTTGAGGAGGATGAACCCGGAGTTTACATTACCATCAAAGCAATGCCGGGTGGTAAAAGGGAGATCAAACGAGTCAGGTTTAGCCGCGAAAAATTTGGGGAGGTGCATGCTAGGCTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACTATACTTGTGA 1095 0.4721 MLTCIPRTKKLGDDSLSHQDDSDPNNNAKNNNQAVKSITSQIKDMALKASGVYKHCGTCTGPSRLGVSNKGESLSPELESERFRRLYRRNGSGSSSRRMWGKELEERLKGISSGEGTPSSGGGGGSGRRVVVVVEEEEGKEWVAQVESGVLISFVSLPGGGNHLKRIRFSRDIFNKWQAQRWWAENFDKVMELYNVQRVNHQAFPLPTPPRSEDESSKHESVEDIPATPPLTRERLAMGYSSSDSFDVQSMQSRHHNDSTGMNSTPKVSTISAAKTEISSMDASIRSCSSREADYSEDISISNVSDMETEWVEEDEPGVYITIKAMPGGKREIKRVRFSREKFGEVHARLWWEENRARIHELYL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0122 364 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 364 - -
Lan14g0122 364 Pfam Transcription factor BRX N-terminal domain 29 59 IPR027988 -
Lan14g0122 364 ProSiteProfiles BRX domain profile. 309 364 IPR013591 -
Lan14g0122 364 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Lan14g0122 364 Pfam Transcription factor regulating root and shoot growth via Pin3 308 363 IPR013591 -
Lan14g0122 364 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Lan14g0122 364 MobiDBLite consensus disorder prediction 204 229 - -
Lan14g0122 364 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 364 IPR044532 -
Lan14g0122 364 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0122 Lan-Chr14 1519395 1525312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0122 1 364 Major Intrinsic Protein MIP AT1G31880 40.691 1.22e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0122 - - mnt:21409969 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0983 12 16585758 16590874 Lan14g0122 14 1519395 1525312 PCT
Lan1g1291 1 22654028 22658415 Lan14g0122 14 1519395 1525312 PCT
Lan1g0423 1 3390637 3397075 Lan14g0122 14 1519395 1525312 PCT
Lan14g0122 14 1519395 1525312 Lan12g0983 12 16585758 16590874 PCT
Lan14g0122 14 1519395 1525312 Lan1g1291 1 22654028 22658415 PCT
Lan14g0122 14 1519395 1525312 Lan1g0423 1 3390637 3397075 PCT