Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0110 ATGCAGAAAAAGTCGACATTGCCATTGAATGACGGAAGAATCGCAAATGCGAGTAAGAAGAAGGTTCTATGCGACAAAGAAGAGTTGGTGAAGCTTCTAAGATGGAATTTTGGGTATTCTGATTTTAGGGGTAAGCAATTGGATGCTATTCAAGCTGTGCTCTCAGGAAGAGATTGCTTTTGTCTTATGCCAACTGGAGGAGGAAAGTCAATGTGTTACCAGATCCCTGCGTTGGCAAAGAAAACCGGCATTGTACTTGTTGTTTGTCCTTTAATAGCTTTGATGTTAGGAAAACCAAGTGATGGCACTAAAGGAGAAAGGTATTGCTGCGGAATTTCTCTCCTCAACAAAAACTGCAGATGCAAAAAGCAAGTTCGATACAAAGATCTTTTAGACGATGCTTATGCTGATTTATCTAATACAATCAAATCTATGGGAGATGTCTGTGCAATAGTTTACTGCCTTGAACGGTCGATGTGTGATGACTTGTCACTTCGTCTATCCCATAATGGCATTTCCTGTGCTGCTTATCATGCAGGATTGAATAATAAAGTGCGAACTTCTGTCTTAGATGATTGGATTTCTTCTAAGATACAAGTCGTTGTTGCCACTGTCGCTTTTGGAATGGGCATTGATAGAAAGGACGTCAGAATTGTGTGCCACTTCAACATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCAGGACGCGATCAATTGCCCTCTACAAGTCTGTTGTACTATGGGGTAGACGATCGCAAAAAAATGGAATTTATATTGCGCAACTCCGGAAGCAAGAAGCTACAATCATCAAGTTCACAACAAGATTCATCCAAAAGGTCCCTGGCTGAATTCAACCAGATGGTTGAATATTGTGATGGATCTGGATGTCGTAGGAAAAGAATTCTCGAGAGTTTTGGGGAACAGGTAACTGCTTCACTGTGTGGAAAAACATGCGATGCCTGCAGACATCCAAACTTAGTTGCCAGATATTTGGAGGATCTCAAAACTGCCTGTGTTTTACGCCAGAAAATTGGTTCTTCTCCAATTTTTATGACCAGCTCCACTGACAGAATTGACAGAGAACAGTCATCTGAATTCTGGAATCGTGGTGATGAAGCAAGTGGATCAGAGGAAGAAATATCTGACTCAGATGATGGTAATGAGGTTGTGAACAACCTAACCAGGTCAAAGGTTCAATCCAGATCGGGAGTGAATGCAAAGCTTGCATTCTTACAACGTGCAGAAGAAAACTTCTATCGAAATAAGGACACCGATAAACAGAGAAAAAAAGTTGAGAATAATGCTATTTCCGATACAATGCGAGGAGCGAGCAGGCAAAGATTACAAAATGCTCTAAAGCAGGCCCAGCAACGGCTTGATAACTTCAAGATTGAAGTAGAAACATCAGCATCTCTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGCAAATCATTCTATTATTCTCAAGTGGCTAGTACTGTAAGGTGGCTGACAACTACAACTCCTGACAATCTGATAAACCGACTTGGTGCAATGAATGTTTCGACATCGATCAGTGTCTCGCCTAAAGCTGAGAATTCACTCACACCATCACCCGCTTTAGATCCTAATGCAAAAGAAGATTCAAGCAATGAACTCCCAGACAATGCTAGATTAGAAACTGCGGCCCGGGCTATGCCAACAGAAAGTTCTTCCTTTGATACAAAGTTGCCAGAAATACCATCCTTCTCTGAATTCGTCAACAGTAGGAAGGAAAAAAGGGACCAGTTAAAGGACACAAAGAAGTATTCATCAAGAGTAGAAAAAAAGATGAGGTTAGAGTAG 1845 0.4125 MQKKSTLPLNDGRIANASKKKVLCDKEELVKLLRWNFGYSDFRGKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKKTGIVLVVCPLIALMLGKPSDGTKGERYCCGISLLNKNCRCKKQVRYKDLLDDAYADLSNTIKSMGDVCAIVYCLERSMCDDLSLRLSHNGISCAAYHAGLNNKVRTSVLDDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRKKMEFILRNSGSKKLQSSSSQQDSSKRSLAEFNQMVEYCDGSGCRRKRILESFGEQVTASLCGKTCDACRHPNLVARYLEDLKTACVLRQKIGSSPIFMTSSTDRIDREQSSEFWNRGDEASGSEEEISDSDDGNEVVNNLTRSKVQSRSGVNAKLAFLQRAEENFYRNKDTDKQRKKVENNAISDTMRGASRQRLQNALKQAQQRLDNFKIEVETSASLLEEECYKKYGKVGKSFYYSQVASTVRWLTTTTPDNLINRLGAMNVSTSISVSPKAENSLTPSPALDPNAKEDSSNELPDNARLETAARAMPTESSSFDTKLPEIPSFSEFVNSRKEKRDQLKDTKKYSSRVEKKMRLE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0110 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 345 IPR027417 -
Lan14g0110 614 MobiDBLite consensus disorder prediction 528 545 - -
Lan14g0110 614 MobiDBLite consensus disorder prediction 528 614 - -
Lan14g0110 614 Gene3D - 119 344 IPR027417 -
Lan14g0110 614 Pfam DEAD/DEAH box helicase 46 95 IPR011545 GO:0003676|GO:0005524
Lan14g0110 614 CDD SF2_C_RecQ 125 251 - -
Lan14g0110 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 95 IPR027417 -
Lan14g0110 614 Coils Coil 449 476 - -
Lan14g0110 614 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 141 282 IPR001650 -
Lan14g0110 614 Gene3D - 7 101 IPR027417 -
Lan14g0110 614 SMART helicmild6 161 242 IPR001650 -
Lan14g0110 614 PANTHER DNA HELICASE RECQ FAMILY MEMBER 16 95 - -
Lan14g0110 614 PANTHER DNA HELICASE RECQ FAMILY MEMBER 124 598 - -
Lan14g0110 614 SMART ultradead3 38 541 IPR014001 -
Lan14g0110 614 MobiDBLite consensus disorder prediction 365 380 - -
Lan14g0110 614 Pfam Helicase conserved C-terminal domain 146 240 IPR001650 -
Lan14g0110 614 Pfam RecQ zinc-binding 255 326 IPR032284 -
Lan14g0110 614 MobiDBLite consensus disorder prediction 365 392 - -
Lan14g0110 614 MobiDBLite consensus disorder prediction 586 614 - -
Lan14g0110 614 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 124 598 - -
Lan14g0110 614 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 16 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0110 Lan-Chr14 1420695 1430215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0110 133 288 Eukaryotic Initiation Factors Gene Family AT3G19760 23.718 7.10e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0110 - K10901 gmx:100819601 731.095