Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0104 ATGTCTACCTCATCGGAATACTCAGATTTTTCCGGCCAAAAACCGGTGAGGTTGCCGGAGAAAACAAGTTTCTCTCAGACTTGTAGTTTATTGAGTCAATACATAAAGGAAAAGGGTAGTTTTGGAGATCTTAATCTTGGGATGACATGCAACATAGAACCAATTGGGTCACCTGAGACATCTTGTCAATCTGCAACAACCATGAACTTGTTTCCTACCAATGAAAATAACATGCCACCAAAGAACCTTACACCTAGTGCAATTAAGCCTATGAACAAGGGATCTAAGGCTGCACAATTAACAATCTTCTATGCTGGACAAGTTATTATATTTGATGATGTTTCGGCTGATAAAGCCAATGAGCTCATGTCCTTTGTCAGCAAAGGAATATCCGAAACCCAGAGCCAGCCATCATTTCCTCATAATTTGATCAGAACTTCGGCTGATTCGGTTACTCCGGTTGTTCCTAATGTGACTACCATCCCTGGTTCTGGCATCGACTCGATTCAAGAACGCTCTCAACCATCATCCAGACCTGTTGTTTGTGATTTACCAATTGCTCGGAAAGCTTCACTTCATCGGTTCCTGGCGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAATAACAAGTCACATGGAAGCTGCTAATAAGGGGGTTGAATCCATGTCTTGGCTTGGCTTAGGTGCTAAATCACCTCAAATCTGA 714 0.4216 MSTSSEYSDFSGQKPVRLPEKTSFSQTCSLLSQYIKEKGSFGDLNLGMTCNIEPIGSPETSCQSATTMNLFPTNENNMPPKNLTPSAIKPMNKGSKAAQLTIFYAGQVIIFDDVSADKANELMSFVSKGISETQSQPSFPHNLIRTSADSVTPVVPNVTTIPGSGIDSIQERSQPSSRPVVCDLPIARKASLHRFLAKRKDRIAAKAPYQITSHMEAANKGVESMSWLGLGAKSPQI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0104 237 Pfam tify domain 96 126 IPR010399 -
Lan14g0104 237 SMART tify_2 93 128 IPR010399 -
Lan14g0104 237 Pfam Jas motif 185 210 IPR018467 -
Lan14g0104 237 PANTHER PROTEIN TIFY 10A 20 231 - -
Lan14g0104 237 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 231 IPR040390 -
Lan14g0104 237 ProSiteProfiles Tify domain profile. 93 128 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0104 Lan-Chr14 1376743 1379156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0104 1 233 Tify Gene Family AT1G19180 40.602 1.01e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan14g0104 tify 9.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0104 K13464 - gmx:100801449 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0188 15 2014348 2016921 Lan14g0104 14 1376743 1379156 LSH
Lan12g0959 12 16446447 16448923 Lan14g0104 14 1376743 1379156 PCT
Lan1g1316 1 22866242 22868277 Lan14g0104 14 1376743 1379156 PCT
Lan1g0443 1 3572478 3574732 Lan14g0104 14 1376743 1379156 PCT
Lan14g0104 14 1376743 1379156 Lan12g0959 12 16446447 16448923 PCT
Lan14g0104 14 1376743 1379156 Lan1g1316 1 22866242 22868277 PCT
Lan14g0104 14 1376743 1379156 Lan1g0443 1 3572478 3574732 PCT