Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0101 ATGAAGGTTCCTACCAATGGTTACTTGACAAATTCAGGGGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTTTCTTTACCTCCGGCTGGGAGTCTTGTGGTTTACTTCCCGCAAGGGCACAGTGAACAAGTTGCAGCATCCATGCAAAAGGAGGCAGACTTCATACCAAGTTACCCGAATCTTCCGTCCAAGTTGATTTGCATGCTTCACAGTGTTGCCTTGCATGCTGATCTTGAAACAGATGAAGTCTATGCACAAATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATGCTAGCATCAGACACGGGCCTCAAACAAAACCAACAACCTACTGAGTTCTTTTGCAAAACTCTTACCGCAAGTGACACAAGTACTCATGGTGGATTTTCAGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCACCTCTGGACTTTTCATTGCAACCTCCAGCTCAGGAAATTGTTGCCAAAGATTTGCATGACAACACATGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTATTAACTACCGGTTGGAGTGTCTTTGTTAGCACAAAGAGATTGTTTGCCGGAGATTCTGTTCTTTTTATCAGAGATGAAAAACAACAGCTTCTTTTAGGTATAAAGCATGCAAATAGACAGCAGCCAGCACTATCTTCATCGGTAATATCCAGCGACAGCATGCATATTGGCGTTCTTGCTGCTGCAGCTCATGCAGCTTCAAATAACAGTCCGTTTACTATATTTTACAATCCAAGGGCCAGCCCCTCTGAATTTGTAATTCCGTTGGCCAAGTATAATAAGGCCTTGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAGACTGAGGATTCCGGAGTACGCAGATATATGGGCACAATCACTGGAATCAGTGACTTGGATCCTGCTAGATGGAAGAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACATCTGGTGAGCGCCCAGGCAGAGTTTCAATTTGGGGTATTGAACCAGTAGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTCGGCTCAAGTTCCCCAAGCAACCAGGAATGCCAGAAGATGAGACTGATGTAGAAAATGCTTTCAAGAGGGTGATGCCCTGGCTCGGTGATGACCTTGGCATGAAGGATGCCTCAAGCTCATTATTCCCTGGTTTGAGCTTAGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCTCCTCCTCAATCAGGATTTTTCCCTTCATCCATGCTTTCATCTGATACGCTGCACGGTAACCTTAACACTGATGATCCATCGAAGTTATTGAACTTTCAAGCCCCCGTGATGACTTCACCACCAAGTCTTCAATTTAATAAACTTAACCTACCAAACCAAGTCAACCAATTGCAACAGTCCCCAACATCATGGCCTCAGCAGCAGGAACAGCAGCAGAAGATGCAGTTGATGTTGCAAACACCAATGAACCAGCTCCAGCAGCAGCAGCAGCATCAGCAACAGCAGCAGAGGCACCAACAGCTTCCTGAGCCACAAAACCTAACACAGCAACAACAGCCCGAACTGCCTCAACAGAGAGATCGGCCGCCACAACAACAGCAACAGTTCTCTCAACAAACCATTATGAATAATGAGGTAGTTACTTCTAACCAAATTCCAAATCAGTGTATACAGCAACAAGTACCCTATTCTCAGCTTCAGCAACAGCAATTATTGTCAGGCAGTGTCCCACCCCAACAAAGCACCCAACCGGTCAGTAAGAACACATCGCTAGTGACATTTTTACCACAAGACTCACAGTTTCAGCATCAGATAGGCCAGCAAGCTAATCTCTTACAGAGGCAGCAGCAGGCACAGATGCAACAATCTTCATTGCAGTTATTGCAACAAAGCATGTCACAGAGAGCATCACAGCAACCACAAGTGACTCAAATGTCACAGCAAAGCCCGTCAGAGCAACAACTACAGTTGCTACAGAAATTACAGCAACAACAGCAGCAGCAACTTCATTCCACGACGCCTAGCGCACTTTTGCAGTCTCAGTTTCTACACCAACAAAATCAGCAGTTACCACAACACCCTCTATCACCGCATTGGTCTCAACAACTTGGCAACAATGCATTCTCAACAGAGAAACTTCTCAACACCAACAACAACTTCTCTTCATCTCTGATGCAATTACAACAGCCTCCTGCGAACCAATCCCTGTATACACATAAATCACTTACTACTACTATATGTCCCCCCAGTCTTACAGATGTAGATGCCCTCTCATGCTCAACTTCACCATCTGATAATAACTGCCAAATATCTCCTAACTTTTTGAAGAGAAATCATCAAGTACCATCCACATTAGGGGGAACTTCAGTGGTTGAGCCCACAAGTAATCTGATGCAGGAGCTTCACAGTAAGTCTGACATGCAAATTAAACATGAATTATCCGGTATGAAAGGACCTGACCAGCTAAAATATAAAGGGACAATCACGGATCACCTGGAAGCTTCTTCTGGAACATCTTACAGTATTGACCCGGTTAACATCCACCAGAACTTCCAACTTCCTAACTTCTGCATGGACGGGGATGTCCAATCACACCCTAGAAGCAATCTACCGTTTTCATCAAACCTCGATGGATTAACACCTGATACCTTGCTCTCAAGGGGTTATGACTCACAAAAAGATCTTCAAAACTTGATGTCTAATTATGGTAGTGCTCCAAGAGGCATTGAAACTGAGCTATCCACTGCTGATATCAGTCCTCAGTCATTTGGGGTTCGGAACATGCCTTGTAAGCCTGCTAGCTCAAATGATATGGCCATCAATGATGCTGGCATTATGAATAATGGCTTGTGGGCTAACCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAAGTTGGATCTGTTGGAAGATGTATCGATGTCACCCGTTACAGAGGTTACGATGAACTCCGGTATGATTTAGCTAGCATGTTTGGGATTGAAGGGCAGCTTGAAGATCCTCAAAGGACCGAGTGGAAACTAGTATATGTGGATAATGAAAACGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCAGAGGTGCAACAAATGAGCTTGGATGGTGATTTAGGAGGTCATGTTCCAATCTCCAATCAAGCTTGTAGTGGAACAGAAAGTGGCAATGCATGGTATGATGATAACTCAGCAGGCTCATATAATAGATAA 3321 0.4396 MKVPTNGYLTNSGEGERKTINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHSVALHADLETDEVYAQMTLQPVNKYDKEAMLASDTGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSLQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKHANRQQPALSSSVISSDSMHIGVLAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPARWKNSQWRNLQVGWDESTSGERPGRVSIWGIEPVVTPFYICPPPFFRLKFPKQPGMPEDETDVENAFKRVMPWLGDDLGMKDASSSLFPGLSLVQWMSMQQNNQFSPPQSGFFPSSMLSSDTLHGNLNTDDPSKLLNFQAPVMTSPPSLQFNKLNLPNQVNQLQQSPTSWPQQQEQQQKMQLMLQTPMNQLQQQQQHQQQQQRHQQLPEPQNLTQQQQPELPQQRDRPPQQQQQFSQQTIMNNEVVTSNQIPNQCIQQQVPYSQLQQQQLLSGSVPPQQSTQPVSKNTSLVTFLPQDSQFQHQIGQQANLLQRQQQAQMQQSSLQLLQQSMSQRASQQPQVTQMSQQSPSEQQLQLLQKLQQQQQQQLHSTTPSALLQSQFLHQQNQQLPQHPLSPHWSQQLGNNAFSTEKLLNTNNNFSSSLMQLQQPPANQSLYTHKSLTTTICPPSLTDVDALSCSTSPSDNNCQISPNFLKRNHQVPSTLGGTSVVEPTSNLMQELHSKSDMQIKHELSGMKGPDQLKYKGTITDHLEASSGTSYSIDPVNIHQNFQLPNFCMDGDVQSHPRSNLPFSSNLDGLTPDTLLSRGYDSQKDLQNLMSNYGSAPRGIETELSTADISPQSFGVRNMPCKPASSNDMAINDAGIMNNGLWANQTQRMRTYTKVQKVGSVGRCIDVTRYRGYDELRYDLASMFGIEGQLEDPQRTEWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGGHVPISNQACSGTESGNAWYDDNSAGSYNR* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0101 1106 MobiDBLite consensus disorder prediction 646 681 - -
Lan14g0101 1106 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1095 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan14g0101 1106 Gene3D - 123 227 IPR015300 -
Lan14g0101 1106 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Lan14g0101 1106 ProSiteProfiles PB1 domain profile. 981 1074 IPR000270 GO:0005515
Lan14g0101 1106 Gene3D - 289 360 - -
Lan14g0101 1106 CDD B3_DNA 125 217 IPR003340 GO:0003677
Lan14g0101 1106 Gene3D - 976 1070 - -
Lan14g0101 1106 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Lan14g0101 1106 PANTHER AUXIN RESPONSE FACTOR 19 1 1095 - -
Lan14g0101 1106 Pfam B3 DNA binding domain 126 224 IPR003340 GO:0003677
Lan14g0101 1106 SUPERFAMILY CAD & PB1 domains 996 1059 - -
Lan14g0101 1106 MobiDBLite consensus disorder prediction 511 559 - -
Lan14g0101 1106 SMART B3_2 126 228 IPR003340 GO:0003677
Lan14g0101 1106 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan14g0101 1106 Pfam AUX/IAA family 978 1067 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0101 Lan-Chr14 1340724 1351366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0101 1 489 B3 DNA Binding Superfamily AT1G19220 80.982 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan14g0101 AUX_IAA 1.8e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0101 K14486 - twl:119993276 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0190 15 2043693 2050653 Lan14g0101 14 1340724 1351366 LSH
Lan12g0957 12 16427281 16434584 Lan14g0101 14 1340724 1351366 PCT
Lan1g0446 1 3588196 3595697 Lan14g0101 14 1340724 1351366 PCT
Lan14g0101 14 1340724 1351366 Lan12g0957 12 16427281 16434584 PCT
Lan14g0101 14 1340724 1351366 Lan1g0446 1 3588196 3595697 PCT