Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0089 ATGGCATTTCAAGATTTTGCAATCTTATCTGAAAGGAGAAGAAATGAGAGGAAAGAAAAAGTGAGAAAAAGGATTATTCTTGGTGTAGTTTCATCCATTCTCATTGTATGTGTTATAGGTGCTGCAACATTTGTTCTTGTCAACAAAACTAGCTCTGAACACAATGCCAACAAAAGACCTCCAACTTCTGCCGATACGAAACTCGAAAATTATTTAAAGATAGTAAAAACAGTATGTAGTTCAGTTGATTACAAGACTAAATGTGAAGGTCCCCTTGTTGAGGAAGTCGAAAAGGATCCGAAATTGGCGCAGCCGAAGGAACTTCTCAAGGAATCCATCAAACTTGCTCAGCAAGAAATTAACAAGGCCTTTAACAAAACAACTTCTATGAAGTTTGAATCAGAAATGGAAAAGGGAGCATATGAAGATTGCAAGCAGCTTATAGATGATGCTAGGGAAGAGTTAGGATTCTCCATATCTGAAATTAGCAAAAATGATTTGAAGAAGCTTTCAACAAGAACTCCTGAATTGAACAATTGGCTTAGTGCAGTCATATCATACCACCAAACATGCATCGATGGATTCTCCGATGGCGAACTAAAGACACGACTTAAACAACTTTTCCAAGATCCACAAGAATTTGTTAGCAATTCCCTTTCCATTGTGTCTGACTTGTCTTCTTTCCTTTCTGCGTTCCAACCCGATGCGACTCGTCACTTGCTATCGGAGAAAAGTGATGGATTGCCTCCTTGGATTAACGGCGAGGATAGAAGGATGTTGAAGGCAGCAGATGACAAGCCCACACCTAATGTCACTGTGGCAAAAGATGGCTCTGGAAACTTCAAAACCATATCTGAGGCATTAACAGCTATGCCACAAACATATACAGGACGCTATGTGGTTTATGTGAAAGAAGGAATATATGAGGAGACAGTGACAGTGACAAAGAAAATGGTAAATCTAACCATTTATGGTGATGGATCACCAAAGAGTATCATCACTGGCAACAAAAATTTTGTAGATGGAGTCAGGACTTTCCAAACTGCAGCATTTGTGGTTCTTGGAGATGGGTTCTTGGGAAAGTCGATGGGATTCAGGAACACTGCTGGAGCAGAAAAGCATCAAGCAGTGGCTGCTAGAGTACAAGCTGATCGTGCAGTGTTTGTGAATTGTCGTTTTGAGGGATATCAAGACACTTTATATGCCCAAACGCATAGACAATTCTACCGTAGTTGTGTCATTGCAGGCACAATAGATTTCATCTTTGGTGATGCAGCTGCTATCTTCCAAAACTGCATCATCCAAGTTAGGAAACCAATGGAGAATCAACAGAACATTGTCACTGCTCAAGGTAGATACCAACATCAAGAAACAACTGGTTTTGTTCTGCAAAAATGCGAGATTAAAGCCGATGAGAAACTAGTTCCAGAGAAAGATAAAATCAAAAGCTACCTTGGTAGACCATGGAAGGAGTACTCAAGAACCATCATCATGGAATCAGAAATTGGTGACATAATTCACCCAGATGGATGGTTACCTTGGGAAGGAGACTTTGCACTCAAGACATTGTATTATGGTGAGTTCAACAATACAGGACCTGGTGCCAAAACAAATGGTAGGGTCAATTGGGTTGGTCACAAAGTTATTAACAAGGAAGAAGCTGCCAAGTTTGCAGCAGGGCCTTTCTTGAATGGAACATGGATCAATGGTAAAGGTGTACCTGCTCAAATGGGTTTGTATAATTGA 1746 0.4032 MAFQDFAILSERRRNERKEKVRKRIILGVVSSILIVCVIGAATFVLVNKTSSEHNANKRPPTSADTKLENYLKIVKTVCSSVDYKTKCEGPLVEEVEKDPKLAQPKELLKESIKLAQQEINKAFNKTTSMKFESEMEKGAYEDCKQLIDDAREELGFSISEISKNDLKKLSTRTPELNNWLSAVISYHQTCIDGFSDGELKTRLKQLFQDPQEFVSNSLSIVSDLSSFLSAFQPDATRHLLSEKSDGLPPWINGEDRRMLKAADDKPTPNVTVAKDGSGNFKTISEALTAMPQTYTGRYVVYVKEGIYEETVTVTKKMVNLTIYGDGSPKSIITGNKNFVDGVRTFQTAAFVVLGDGFLGKSMGFRNTAGAEKHQAVAARVQADRAVFVNCRFEGYQDTLYAQTHRQFYRSCVIAGTIDFIFGDAAAIFQNCIIQVRKPMENQQNIVTAQGRYQHQETTGFVLQKCEIKADEKLVPEKDKIKSYLGRPWKEYSRTIIMESEIGDIIHPDGWLPWEGDFALKTLYYGEFNNTGPGAKTNGRVNWVGHKVINKEEAAKFAAGPFLNGTWINGKGVPAQMGLYN* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0089 581 Pfam Pectinesterase 270 565 IPR000070 GO:0030599|GO:0042545
Lan14g0089 581 Gene3D - 264 579 IPR012334 -
Lan14g0089 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 227 IPR035513 -
Lan14g0089 581 Coils Coil 106 126 - -
Lan14g0089 581 Pfam Plant invertase/pectin methylesterase inhibitor 74 221 IPR006501 GO:0004857
Lan14g0089 581 SMART PMEI_2 70 221 IPR006501 GO:0004857
Lan14g0089 581 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Lan14g0089 581 CDD PMEI-like_3 77 227 - -
Lan14g0089 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 226 IPR035513 -
Lan14g0089 581 PANTHER PECTINESTERASE 14 579 - -
Lan14g0089 581 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 223 IPR006501 GO:0004857
Lan14g0089 581 PANTHER PECTINESTERASE 14 579 - -
Lan14g0089 581 SUPERFAMILY Pectin lyase-like 268 569 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0089 Lan-Chr14 1205707 1208225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0089 1 581 Carbohydrate Esterase AT2G26450 49.757 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0089 - - gmx:100784679 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0206 15 2222143 2224651 Lan14g0089 14 1205707 1208225 LSH
Lan14g0089 14 1205707 1208225 Lan3g0951 3 20792276 20794868 LSH
Lan12g0942 12 16304389 16306723 Lan14g0089 14 1205707 1208225 PCT
Lan14g0089 14 1205707 1208225 Lan12g0942 12 16304389 16306723 PCT