Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0087 ATGGCTTCCACATCTCATAAACTCTTCTTCTTTCTACTTACAATATTCTTCTCACATACTTTTGCTGCAAACTCATCCAATGCTACAACAACATTTCATGCTAACCTTTCATCATTAAGATCCATTTGCAAAACCACACCATACCCAGAAATTTGTTTCAACTCATTAAAACTCTCCATCTCAATAAACATAAGTCCAAACATCATCACTTACCTTCTCAAAACCCTCCAAGTAGCAATATCTGAAGCCACAAAGCTAACAAATCTGTTACAAAATGCTGGTGTAAACTCAAACATCATAGAGAAACAAAAAGGAACAGTCCAAGATTGCAATGAACTTCACCAATCCACTTTAACTTCATTGAAAAAATCATTGTCATGGATTCAAAGTAAGGACTCAAAGAACATGGTTAATGCAAGAGCATATCTTAGTGCAGCAGTTACCAACAAGAACACATGTTTAGAAGGTTTAGATTCTGCTTCTGGTACAATGAAACCAGTTTTAGTGAATTCTTTGATCAACACATACAAGCATGTAAGTAACTCTCTTTCAATGCTCTCTAAGTCAAGGGTTAAGGGTCCTAAAGGGTTGAAAAAGAGTCCTTTGATGAGTAGTACTAATACCCCATCATGGTTTTCAAGAAAAGATCTTAGCTTTGTGATTGGTGGTGGTGGAGATGGTGAAGATTATGTTCCAAATGATGTGATTGTTGTAGCTTCTGATGGAAGTGGAAACTTTAGTAGTATTAATGATGCTATAAACTTTGCTCCAAATAACAGCTATGATAGAACAGTGGTGTATGTTAAAGAAGGGATTTATGAAGAAAATGTTGAAATACCAATTTATAAGACTAACATTGTTCTTCTTGGTGATGGAAGTGATGTCACAATCATAACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACTTTAGCTGTTTGTGGTGAGGGATTTCTAGCACGTGATATAGCATTTGAGAACAGTGCAGGAGCAGAGAAGCATCAAGCATCAGCATTAAGAGTAAATGCAGATTTAACTGCATTTTACAGATGTGCCATTTATGGTTACCAAGACACTCTTTATGTTCACTCTTTTAGACAATTCTATAGAGAATGTGACATTTATGGTACCATAGATTTCATATTTGGTAATGCAGCTGTTGTATTTCAAGCATGTAACATTATATCCAAATTGCCAATGTCAGGCCAATTCACTGTAATCACAGCACAATCAAGAGATTCACCGGACGAAGACACCGGAATCTCCATCCAGAACTGCTCAATTCTCGCGACCACCGATCTTTACTCGAACTCTAGCAGCTTCAAGAGCTATCTGGGTAGGCCATGGAGGGTATATTCTAGAGTTGTATACCTTGAAACATACATTGATGACTTTATTGACCAAATGGGTTGGACAAAATGGTCTAATAAAAATGATGAAGGAGGCTTAGATACATTATATTATGGAGAGTATATGAATTATGGACCTGGTTCTAAGACAGAAAATCGTGTAGCATGGAATGGATATCATGTAATGGATTACAATGATGCTTATAATTTCACTGTTTCAGAGTTTATTAGTGCTGATGATTGGCTTCAATCTACTTCTTTCCCTTATGATGATGGGATTTGA 1647 0.3649 MASTSHKLFFFLLTIFFSHTFAANSSNATTTFHANLSSLRSICKTTPYPEICFNSLKLSISINISPNIITYLLKTLQVAISEATKLTNLLQNAGVNSNIIEKQKGTVQDCNELHQSTLTSLKKSLSWIQSKDSKNMVNARAYLSAAVTNKNTCLEGLDSASGTMKPVLVNSLINTYKHVSNSLSMLSKSRVKGPKGLKKSPLMSSTNTPSWFSRKDLSFVIGGGGDGEDYVPNDVIVVASDGSGNFSSINDAINFAPNNSYDRTVVYVKEGIYEENVEIPIYKTNIVLLGDGSDVTIITGNRSVVDGWTTFRSATLAVCGEGFLARDIAFENSAGAEKHQASALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVFQACNIISKLPMSGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNSSSFKSYLGRPWRVYSRVVYLETYIDDFIDQMGWTKWSNKNDEGGLDTLYYGEYMNYGPGSKTENRVAWNGYHVMDYNDAYNFTVSEFISADDWLQSTSFPYDDGI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0087 548 SUPERFAMILY Pectin lyase-like 231 545 IPR011050 -
Lan14g0087 548 PANTHER PECTINESTERASE 8 547 - -
Lan14g0087 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 187 IPR035513 -
Lan14g0087 548 ProSitePatterns Pectinesterase signature 2. 379 388 IPR033131 -
Lan14g0087 548 PANTHER PECTINESTERASE 8 547 - -
Lan14g0087 548 CDD PMEI-like_3 41 188 - -
Lan14g0087 548 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
Lan14g0087 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 189 IPR035513 -
Lan14g0087 548 SMART PMEI_2 34 185 IPR006501 GO:0004857
Lan14g0087 548 Pfam Pectinesterase 236 533 IPR000070 GO:0030599|GO:0042545
Lan14g0087 548 Gene3D - 232 548 IPR012334 -
Lan14g0087 548 Pfam Plant invertase/pectin methylesterase inhibitor 38 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0087 Lan-Chr14 1199101 1201324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0087 37 548 Carbohydrate Esterase AT2G26440 65.444 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0087 - - gmx:100776969 807.364