Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0078 ATGGTGATATTAAAAGAAGGACATAGAGTGCAGCTTGGGAAATATGAATTTGGTGAGACAATTGGAGAAGGTAATTTTGGAAAAGTGAAGTTGGCTAAGGATATTAATACTGACCAACTTTTTGCTGTTAAGATTCTTGACAAGAGCAAGCTCATTCATCTTAATAACACTGATAGGATAAAGAGGGAAATAGCCACCTTAAAGGTCCTCAAGCATCCAAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTCGAGTATGTGACTGGAGGAGAATTATTTGAAAAAATTAGATCCAAGGGTAAACTTACAGAAACTATAGGTAGGAAGATATTTCAACAGTTGATTGATGGTGTAAGTTATTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGTTGGAAAATGTACTTGTGGATGCCAAAGGGAACATAAAGATAACAGACTTTAATCTTAGTGCTTTACCTCAGAATTTTAGGGAAGATGGGTTGTTACATACAACATGTGGAAGTCCGAATTATGTTGCACCCGAAATTATTGCCAACAGAGGCTATGATGGTGCAACATCAGATACATGGTCATGCGGTGTTATCTTGTATGTTATTCTAATAGGATACCTTCCTTTTGATGACAGAAATCTTGCTGTTCTTTATCACAAGATTTTTAAAGGAGATGTTCATATACCAAAATGGCTATCACCTGGTGCTAAAAATATGATAAATAAAATTCTTGATCCCAATCCTAGAACCCGTTTAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAAGAGGGATATATTCAATCAAATCCAGAGGATGAGGAAGAAAATATACATAGTTATGATGAAGTTCTTTCAATCAATGAAGTGCAACATGAAGCAATAAAAGGGAGTCCAAGATCATCAACCCTTATCAATGCATTTCAATTGATAGGAATGTCTTCATGTCTTGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTATCTGAAAGGAAGATAAGATTTACATCCAACAATTCATCAAAAGATTTGATTGAGAGGATTGAGGTCATTGTAACAGAAATGGGATTTAGAGTTCAGAAGAAAAATGGAATGTTAAAAGTGACACAAGAGAGAAGTCTAAGTAGCCTCTCAGTGGCAGCAGAGGTATTTGAAATAAGCACATCCTTGTATGTAGTAGAATTAAGAAAGCATTATGGAGATTCTACTATATATAGACAGTTATGCAACAAGTTATCCAATGATTTGGGTGTTCAGCAAAAGCAAGATCTAGAAAGCTCAGAAATTATTGGCATTTGA 1323 0.3522 MVILKEGHRVQLGKYEFGETIGEGNFGKVKLAKDINTDQLFAVKILDKSKLIHLNNTDRIKREIATLKVLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFEKIRSKGKLTETIGRKIFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQNFREDGLLHTTCGSPNYVAPEIIANRGYDGATSDTWSCGVILYVILIGYLPFDDRNLAVLYHKIFKGDVHIPKWLSPGAKNMINKILDPNPRTRLTMAMIKEDEWFKEGYIQSNPEDEEENIHSYDEVLSINEVQHEAIKGSPRSSTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNNSSKDLIERIEVIVTEMGFRVQKKNGMLKVTQERSLSSLSVAAEVFEISTSLYVVELRKHYGDSTIYRQLCNKLSNDLGVQQKQDLESSEIIGI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0078 440 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0078 440 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lan14g0078 440 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Lan14g0078 440 Gene3D Transferase(Phosphotransferase) domain 1 95 276 - -
Lan14g0078 440 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Lan14g0078 440 PANTHER - 8 432 - -
Lan14g0078 440 PANTHER CBL-INTERACTING PROTEIN KINASE 21 8 432 - -
Lan14g0078 440 CDD CIPK_C 314 421 - -
Lan14g0078 440 Gene3D Kinase associated domain 1, KA1 308 426 - -
Lan14g0078 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lan14g0078 440 SUPERFAMILY Protein kinase-like (PK-like) 12 283 IPR011009 -
Lan14g0078 440 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0078 440 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0078 440 Pfam NAF domain 311 369 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0078 Lan-Chr14 1088998 1095379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0078 78 430 CBL-interacting serine-threonine protein kinases AT3G17510 69.274 4.06e-172 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan14g0078 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0078 K07198 - gmx:100815660 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0214 15 2317940 2324474 Lan14g0078 14 1088998 1095379 LSH
Lan12g0929 12 16196361 16202891 Lan14g0078 14 1088998 1095379 PCT
Lan1g1344 1 23135527 23140526 Lan14g0078 14 1088998 1095379 PCT
Lan14g0078 14 1088998 1095379 Lan12g0929 12 16196361 16202891 PCT
Lan14g0078 14 1088998 1095379 Lan1g1344 1 23135527 23140526 PCT