Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0074 ATGGTGCCAGAGATGAAGGCTTTTGGGAAGAGAAGTTTGGAGTGGGATTTGAATGATTGGAAATGGGATGGAGATCTTTTCACTGCTACTCCACTGAATCCAGTGCCATCAGATTGGAGGAGCCAAAAACTGTTCCCAGTTGATCCTGAAATTCCGGCAAATGGTGATAGTTCTAACAATTTCGCTTCTCATTGGGACGGTATCGAACCCGGGGAAGGAAATAATGGATTGGAGAAGATGAGAAGAGGTGTTGGTGTTGTTGTTGCTGAAGGGGTGGAGCTGAATAATGAAGGTAGTGGTTTCCTTAATTTGAACCTTGGGGCTCAAGTATACCCGACAATGGAAGGAGAGGAAACCGGTGGAAAGAAGATGAAGGTAACTGGGACTACTTCGACTTCGAATCGCGCTGTATGTCAAGTGGAAGATTGTAGGGCTGATCTTAGTAATGCAAAGGATTACCACCGTCGCCACAAAGTTTGCGATGTGCATTCTAAGGCTAGCAGAGCACTGGTGGGGAATGTTATGCAGAGGTTCTGCCAACAGTGTAGCAGGTTTCATATTCTTCAAGAGTTTGATGAAGGGAAGAGAAGCTGTCGTAGACGTCTGGCAGGCCACAACAAGAGGAGGAGGAAAACACATCCTGATCCTACTGTATCTCATGAGGGATCTCTAAATGATGAAAAGGGTAGTAGCTATTTGTTGATGAGTCTGCTGAGGATACTGTCCAATATGCATTCAAATAACTCAGATCATACAAGAAACCAGGATGTTCTCTCTAATCTGCTGCGGAACCTGGCAAGTGTGGCTGGTACAATTAACGGAAGCAGTATAACATCCTTATTGGAGGGATCTCATGATTTGGTAAAAGCCGGGACATCTGCAGCTGCGCAGAATGTTCCAACCACAAATTCAAATGGCCCAATCCATGAGGATCCTCCAGAGTCTCGGGTACAGTGTGAATCAGTGCCTGCTTATGATATGTCACACAAATGTATATCTTTAGGTAACGGTGGAATAGGAAGTTCGAAACCTCCTTCAGGACCACAGTCCGCAAGTGCAATTCGGTCAAGGGACAGTGTTCCGCCTCAATCAGTTGCAGCGGAGACGACAGTTCGCAAGAACGGCTTAAACAACATTGACCTGAATAATGTATATGATGACTTACAGGATAATATCGAGAACCCCTGGAATTCTTGTCCTCCCGCGCCTTCAGGGATTGGGTCTCTTGATCATCCTTTATGTGTACAACGTGACTCTCTCAGGTCAAGTCCGCCACAGACCAGCAGAAACTCAGACTCCACCTCTACCCAGTCACCATCTTGTTCTAGTGGAGAAGCTCAGTGTCGTACAGATCGAATTATTTTCAAACTCTTTGGAGAGGATCCTAAAGATCTTCCCCTCGTTCTCCGGTCAAAGATCCTTAGCTGGTTATCCCACAGCCCCACAGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTGACCGTATATCTCCGTCTCGAAAATTCGGCATGGGAGGAGCTATGCTACAATCTCGGGTCCAGCTTGAGAAAGCTTCTCGCTGCATCAAATGATTCTTTCTGGAGAACAGGATGGGTATATGCAAGAGTGCAGCACTCTGTAGCTTTTCTGCATAATGGTGAGGTGGTGTTAGATGTGCCATTGCACCTTAAAAGCCGACAAAATTGTCAGATTTTGTGTGTAAAACCACTTGCTGTTTCTTCAAGTTCGAATGCTCAATTTACTGTGAAAGGATTCAACCTTTTCCTGACTGGCACAAGGTTGCTCTGTGCGCTTGAAGGGAAGTATCTGGTACAGGACAGTTACGATTTTATTGATAGTGCTGACACAGCTGTTGAACATGATGAAATTCAGCAAGTCAGCTTCTCTTGTCACGTTCCAAATGTGACCGGGAGAGGGTTTATTGAGGTGGAAGATAATGGTCTTAGCAACTGTTCCTTTCCTTTTATAGTTGCAGAGCAAGAAATTTGTTCAGAGATCTGTAAGCTGGATAATGTGATCGAGGCAGCAGAGGCTGCCACTGAGGACATCCAGGTAAAAACTAAACTGATGGAAGAAAAGACTCGAGCGTTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATCGGTGTCGAGTGAAGGTAAGGCTAGGTTCCATGACACCTGTCCAAGATCACTTCCATTTTAGTCGGTTCAAGTGGCTTGTTGGCTTCTCCATGGACCATGATTGGTGTGCTGTGATTAAAAAACTCTTGGACATTATCTTTGATGGTGTTGTCGGCACGGGTGAGCATTCATCCGTTGAGCTTGCATTGTTGGACTTGGGTCTTCTACACAGAGCCGTAAAGAGAAGCTGCAAACCTATGGTGGAACTACTGTTGAGATTTGTGCCAGTTAAAGCTTCAGATGGCGGACACAGAAAAGAGACGCAAGTCGACAAGTCCCTTGACAGATTCTTATTTAGACCCGATGCTGTTGGGCCGGCTGGGTTGACTCCCCTTCATGTTGCGGCAAGTATGAATGGATCAGAGAACATATTAGATGCATTAACTGATGATCAAGGAATGGTGGGAATCGAAGCATGGAAAAGTGCACGGGACGATACAGGTTTAACACCCTACGACTACGCGTCCCTGCGTGGCTTCTACTCCTACATTCATCTTGTCCAGCGGAAAACACGAAAGAAACACGAAAATCAACACGTTCTTGATATCCCTGGCACCCTTGTCGACTGTAACATAAAGCAGAAGCAGTCAGATGGGCATAGGTCATCTAAAGTTTCAAGTTTACAAACTGAGAAGATTGAAACCACAGCAACGACACATCACTGCGGGCAATGCCAGCGCAAGCTGGCATATGGCAGTGGAACGAGAAAGGCAGCACTTGTTTATAGGCCGGCAATGCTGTCAATGGTGGCCATTGCGGCCGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCAAGAGTTGATTATGTATTCCAGCCATTCAGCTGGGAATCATTGAAATATGGGTCAATGTAA 3030 0.4568 MVPEMKAFGKRSLEWDLNDWKWDGDLFTATPLNPVPSDWRSQKLFPVDPEIPANGDSSNNFASHWDGIEPGEGNNGLEKMRRGVGVVVAEGVELNNEGSGFLNLNLGAQVYPTMEGEETGGKKMKVTGTTSTSNRAVCQVEDCRADLSNAKDYHRRHKVCDVHSKASRALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTHPDPTVSHEGSLNDEKGSSYLLMSLLRILSNMHSNNSDHTRNQDVLSNLLRNLASVAGTINGSSITSLLEGSHDLVKAGTSAAAQNVPTTNSNGPIHEDPPESRVQCESVPAYDMSHKCISLGNGGIGSSKPPSGPQSASAIRSRDSVPPQSVAAETTVRKNGLNNIDLNNVYDDLQDNIENPWNSCPPAPSGIGSLDHPLCVQRDSLRSSPPQTSRNSDSTSTQSPSCSSGEAQCRTDRIIFKLFGEDPKDLPLVLRSKILSWLSHSPTEIESYIRPGCIILTVYLRLENSAWEELCYNLGSSLRKLLAASNDSFWRTGWVYARVQHSVAFLHNGEVVLDVPLHLKSRQNCQILCVKPLAVSSSSNAQFTVKGFNLFLTGTRLLCALEGKYLVQDSYDFIDSADTAVEHDEIQQVSFSCHVPNVTGRGFIEVEDNGLSNCSFPFIVAEQEICSEICKLDNVIEAAEAATEDIQVKTKLMEEKTRALYFIQEMGWLLHRCRVKVRLGSMTPVQDHFHFSRFKWLVGFSMDHDWCAVIKKLLDIIFDGVVGTGEHSSVELALLDLGLLHRAVKRSCKPMVELLLRFVPVKASDGGHRKETQVDKSLDRFLFRPDAVGPAGLTPLHVAASMNGSENILDALTDDQGMVGIEAWKSARDDTGLTPYDYASLRGFYSYIHLVQRKTRKKHENQHVLDIPGTLVDCNIKQKQSDGHRSSKVSSLQTEKIETTATTHHCGQCQRKLAYGSGTRKAALVYRPAMLSMVAIAAVCVCVALLFKSSPRVDYVFQPFSWESLKYGSM* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0074 1009 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 7 1008 - -
Lan14g0074 1009 MobiDBLite consensus disorder prediction 202 226 - -
Lan14g0074 1009 MobiDBLite consensus disorder prediction 339 371 - -
Lan14g0074 1009 MobiDBLite consensus disorder prediction 335 371 - -
Lan14g0074 1009 Pfam SBP domain 138 211 IPR004333 GO:0003677
Lan14g0074 1009 ProSiteProfiles Zinc finger SBP-type profile. 135 212 IPR004333 GO:0003677
Lan14g0074 1009 MobiDBLite consensus disorder prediction 416 445 - -
Lan14g0074 1009 SUPERFAMILY SBT domain 136 216 IPR036893 GO:0003677|GO:0005634
Lan14g0074 1009 Gene3D - 128 199 IPR036893 GO:0003677|GO:0005634
Lan14g0074 1009 MobiDBLite consensus disorder prediction 419 445 - -
Lan14g0074 1009 Gene3D - 765 906 IPR036770 -
Lan14g0074 1009 SUPERFAMILY Ankyrin repeat 777 889 IPR036770 -
Lan14g0074 1009 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 1008 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0074 Lan-Chr14 1035769 1045327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0074 9 1008 SBP-box Gene Family AT3G60030 47.817 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan14g0074 SBP 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0074 - - gmx:100776125 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1348 1 23172724 23178776 Lan14g0074 14 1035769 1045327 PCT
Lan14g0074 14 1035769 1045327 Lan1g1348 1 23172724 23178776 PCT