Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0035 ATGACAAGGACTATTATTGTGAGGAGGAATTATCTTCATTATATAAAGAAGTATCAGAGATATGAGAAGCGACATTCAAACATTCCTGCTCACGTATCACCTTGTTTCCGTGTAAAGGAAGGGGATCATGTTATTATTGGCCAATGCAGACCAATCTCAAAGACAGTGAGGTTCAATGTATTGAAAGTGATTCCAGCAGGATCCTCCACCGGTGCGAAGAAGGCATTCGCCGGACTTTGA 240 0.4167 MTRTIIVRRNYLHYIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPISKTVRFNVLKVIPAGSSTGAKKAFAGL* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0035 79 ProSitePatterns Ribosomal protein S17 signature. 41 53 IPR019979 GO:0003735|GO:0005840|GO:0006412
Lan14g0035 79 SUPERFAMILY Nucleic acid-binding proteins 1 67 IPR012340 -
Lan14g0035 79 Pfam Ribosomal protein S17 1 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan14g0035 79 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 78 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan14g0035 79 PANTHER BNAA06G38660D PROTEIN 1 78 - -
Lan14g0035 79 Gene3D - 1 79 - -
Lan14g0035 79 PRINTS Ribosomal protein S17 family signature 8 31 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan14g0035 79 PRINTS Ribosomal protein S17 family signature 41 51 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lan14g0035 79 PRINTS Ribosomal protein S17 family signature 51 58 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0035 Lan-Chr14 539892 541502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0035 1 79 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 87.342 1.25e-48 149