Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0022 ATGACTATGGAGAATCATAAGGGTCATGTGGTGGATGAAGAAGGGGTCAGTGACCCTTTTCCTGTGGGTATGCGTGTTCTTGCAGTTGATGATGACCCAACTTGCCTCAGAGTTTTGGAGACCTTGCTACGCAAATGCCAGTATCATGTTACTACAACTAATCAGGCAATTGAGGCTCTGAGAATGTTGAGGGAAAATAGAAATAACTTTGACCTTGTTATTAGTGATGTGAATATGCCAGACATTGATGGATTTAAGCTCCTTGAATTGGTGGGGCTTGAAATGGACTTACCAGTCATCATGTTGTCAGCACATAGTGATACAAAGCTGGTGATGAAAGGTGTTGCACACGGTGCATGTGATTATTTGCTGAAACCTGTTCGAATCGAGGAGCTGAAGAACATATGGCAACATGTAGTGCGAAGAAAAAAATTTGATGGTGGGGATAAGCCTTCCAAGGAAGAGAGGGCTCCTAATATTGCCGGGGAAGGTAGTCAAGGAATCGTATCAGAAAGCAGTGCAGATCAGAATAGAGCTCTCGGTAAGAGAAGGAAGGAGCAAAGTGAGGATGAAGAAGATGATCTCGAAGGGGATGGAGAAGAGATTGATGACCCCTCAGCGCAGAAGAAGCCTCGTGTAGTTTGGTCAGTTGAGCTGCATAGAAAATTTGTTGCTGCGGTTAATCAGCTGGGCCTTGAAAAGGCTGTTCCAAAGAAAATACTCGACCTTATGAATGTTGAAGGGCTTACACGGGAAAACGTGGCAAGTCATCTGCAGAAATATAGACTCTATCTGAGAAAGGCAACCCAGCAAGCTAGTATGGTTGCTGCATTCGGTGGCAGTGATTCGTACCTGCGGATGGGTTCAATAGATGGATATGAAGATTTTTGCGCCTCGTCTGGATCAGGAAGGATCTCAACCACTACATTACCATCATACGCATCAAGTGGAATTTACGGTAGGCTGAATTCCCCAGCTGGCTTGAACATGAGAGGAATTAGTTCTTCTGCATTAATCCGGTCTGTTCAGCCTCAAAATATTAACAGCGCATTAAGCACAGTTGGAAGCATTCAGCCATCCATGTATCCCTCAAATCAAAGCTCGGGTTTATTGCATGGCATTCCGACATCAATTGAGCTTACACCGTCTAAACAAAGCAATTGTACAACGGGTATAACACAGTTAGGTCAAGTTGATCCGAGTGGATTTACAGTCGCTTCTGGCTTCCAAGACAGTAGGGTTATTGTTGGTAGTGCCGACAATTCTCTACCTTGTGCCTCAAATAATCATTCGATGCTACAAGGAAACTCACACCAAATGCATTCAGGAGCATTTAGAAATCAGTCTTCTGTTAGAGCAGCTCCTCTGAGCACCGAATCTTTTGATGTCGGGTTATGTGGTTCTTCTAACTTGCTGGGTTATAATCGGTGTAATGAAAACTGGCAGAGTGCAGCTCAGTTGTCCAAATTTCCTGCCAATTCTTTGCCGTTGTGTGAGGCTTTCAATAATGACGAACTGCATTCCGCTGGCATAAATGTTTCCAACTCGAATACTCCTATGGGCAACAGTTCAGTTGATTTCTCATCCAGAATGGCGGTTTCTGTTCCATTAGAGGATTCTAGAAGTGAGCTGCGATGTCAAGAAGGCTTCGTTGGGAATATTCTACAGCCTTCATCAAGTTACACACCACGACAAAGATGGGAAGAACATAGACTGGACTACAACCAAAACATGAGTCGTCCATTCGATTCTGTAAATTCACAGGTTTCTCATACTGGAGTGACGAATTCTACGGGGCATGGCTTAAACCAAAATAATTCAATTTGCAGCAATAGAATTGACACATCTTTGTTTGGCCAACTAAATGGGGCTTCCCCATCTATGTACCGGTGCAATGAAGCCGAGAAACTTTCTTCGGATATAAGATTCAAGTCAAACGATGCCTACATTATGGAGCAAATGAAGTCCCAAGATGGATTTATTCAGAATAATTATGGGACCTTGGATGAGATAATGGGTGCAATGGTCAAAAGGGAGCAGCATGATTTGACATTAATGGATGGAGAAATGGGATTTGATGCCTACCCTATTGGATCATGTATCTGA 2106 0.434 MTMENHKGHVVDEEGVSDPFPVGMRVLAVDDDPTCLRVLETLLRKCQYHVTTTNQAIEALRMLRENRNNFDLVISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGVAHGACDYLLKPVRIEELKNIWQHVVRRKKFDGGDKPSKEERAPNIAGEGSQGIVSESSADQNRALGKRRKEQSEDEEDDLEGDGEEIDDPSAQKKPRVVWSVELHRKFVAAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLRKATQQASMVAAFGGSDSYLRMGSIDGYEDFCASSGSGRISTTTLPSYASSGIYGRLNSPAGLNMRGISSSALIRSVQPQNINSALSTVGSIQPSMYPSNQSSGLLHGIPTSIELTPSKQSNCTTGITQLGQVDPSGFTVASGFQDSRVIVGSADNSLPCASNNHSMLQGNSHQMHSGAFRNQSSVRAAPLSTESFDVGLCGSSNLLGYNRCNENWQSAAQLSKFPANSLPLCEAFNNDELHSAGINVSNSNTPMGNSSVDFSSRMAVSVPLEDSRSELRCQEGFVGNILQPSSSYTPRQRWEEHRLDYNQNMSRPFDSVNSQVSHTGVTNSTGHGLNQNNSICSNRIDTSLFGQLNGASPSMYRCNEAEKLSSDIRFKSNDAYIMEQMKSQDGFIQNNYGTLDEIMGAMVKREQHDLTLMDGEMGFDAYPIGSCI* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0022 701 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Lan14g0022 701 PIRSF RR_ARR_type-B 1 701 IPR017053 GO:0003677|GO:0003700|GO:0009736
Lan14g0022 701 Gene3D - 206 268 - -
Lan14g0022 701 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 266 IPR017930 -
Lan14g0022 701 Gene3D - 23 156 - -
Lan14g0022 701 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 682 - -
Lan14g0022 701 SMART REC_2 24 136 IPR001789 GO:0000160
Lan14g0022 701 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 682 IPR045279 GO:0009736
Lan14g0022 701 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 263 IPR006447 GO:0003677
Lan14g0022 701 SUPERFAMILY CheY-like 23 144 IPR011006 -
Lan14g0022 701 MobiDBLite consensus disorder prediction 146 209 - -
Lan14g0022 701 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Lan14g0022 701 CDD REC_typeB_ARR-like 26 140 - -
Lan14g0022 701 Pfam Myb-like DNA-binding domain 212 262 IPR001005 -
Lan14g0022 701 SUPERFAMILY Homeodomain-like 208 267 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0022 Lan-Chr14 366853 371108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0022 18 380 Response Regulator Gene Family AT2G25180 56.216 1.63e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lan14g0022 Response_reg 1.2e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0022 K14491 - gmx:100776075 1070.46