LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan14g0010	ATGAGAATGGATATAAAGTATCCAAATTTGATTATGGCATCTCAAACCAAGAGCCACGTTCTCTTCTTCTTCTTGTGCTTATTACTCATTCCAATTTCTTCAACTCTTTCTGTGAATAAAGAGCAAGAACTAGATCGAATCTTGAGCCTCCCAGGGCAACCACCAGTGACATTTTCTCAGTTTTCTGGTTATGTTACTGTCAATGAGAAACATGGCCGAGCACTCTTCTATTGGTTCACTGAGGCCACTACTTCCCCACAGAATAAACCTCTTATTCTATGGCTAAATGGAGGGCCAGGTTGTTCATCTGTGGCATATGGAGCATCAGAGGAAATTGGACCATTCCGCATTAACAAATCTAGCTCTTCTCTATATCTAAACAAATATGCATGGAATAAAGAAGCAAATATCTTATTTCTTGAATCCCCTGCTGGAGTTGGATTTTCATACACAAATACAAGCTCTGACCTCAAAAATTCTGGGGACAAAAGGACAGCTCAGGATTCTCTCATTTTCCTACTTGGGTGGATTTCAAGATTTCCACAATATAAATATAGGGAGTTTTACATTGCTGGGGAGAGCTATGCAGGTCATTATGTTCCTCAGTTAGCTAAGAAAATTCATGACTATAATAAGCAAAATCCACACATCCTTAATCTCAAAGGATTCATTGTTGGAAATGCTGTGACTGATAACTACTATGATGGGGTAGGAACTGTGACATATTGGTGGAGCCACTCTCTGATATCTGATCAATCATACAAATCTATCCTCAAATACTGTAATTTCACAGAAGATAAAACATCTAAAAAATGTGACAATGCAGTGAGTTATGCAGTTAACCATGAATTTGGAAACATTGATCAATACAGTATCTATACCCCTACATGCACTACATCAAACAACAATTCATTAAGGCACATAAGGTTTAAGGGTTCAATTTTACATAGAATTTCTGGGTATGATCCATGTACTGAAGATTATGCAGAGAAATATTTTAATCATCCTGAAGTGCAGAAAGCAATGCATGCAAATGTTACAAAAATTCCATACAAATGGACTGCTTGCAGTGATGTGCTCATAAAACAGTGGAAGGACTCTGATGTTTCAATATTGCCCATATATAAAGAATTAATTGCAGCAGGTTTGAGAATCTGGGTTTTCAGTGGAGACACAGATTCAGTGGTTCCAGTAACAGCAACTAGGTTTTCTCTAAACCATCTCAACCTCACCATTAAAACTCATTGGTATCCATGGTACTCAGGCAAACAAGTAGGTGGATGGACAGAAGTATATGATGGATTAACTTTTGCATCAATAAGAGGAGCAGGTCATGAGGTACCATTGTTTCAGCCAGAGAGGGCTTATACACTTCTCAGGACATTTTTGGCAGGCAAACAACTGCCAAAATCTTGA	1416	0.3806	MRMDIKYPNLIMASQTKSHVLFFFLCLLLIPISSTLSVNKEQELDRILSLPGQPPVTFSQFSGYVTVNEKHGRALFYWFTEATTSPQNKPLILWLNGGPGCSSVAYGASEEIGPFRINKSSSSLYLNKYAWNKEANILFLESPAGVGFSYTNTSSDLKNSGDKRTAQDSLIFLLGWISRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKQNPHILNLKGFIVGNAVTDNYYDGVGTVTYWWSHSLISDQSYKSILKYCNFTEDKTSKKCDNAVSYAVNHEFGNIDQYSIYTPTCTTSNNNSLRHIRFKGSILHRISGYDPCTEDYAEKYFNHPEVQKAMHANVTKIPYKWTACSDVLIKQWKDSDVSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTHWYPWYSGKQVGGWTEVYDGLTFASIRGAGHEVPLFQPERAYTLLRTFLAGKQLPKS*	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan14g0010	471	ProSitePatterns	Serine carboxypeptidases, serine active site.	190	197	IPR018202	GO:0004185
	Lan14g0010	471	Pfam	Serine carboxypeptidase	52	464	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	PRINTS	Carboxypeptidase C serine protease (S10) family signature	127	139	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	PRINTS	Carboxypeptidase C serine protease (S10) family signature	140	150	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	PRINTS	Carboxypeptidase C serine protease (S10) family signature	176	201	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	PRINTS	Carboxypeptidase C serine protease (S10) family signature	435	448	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	PANTHER	SERINE CARBOXYPEPTIDASE 24	27	470	-	-
	Lan14g0010	471	Gene3D	-	371	465	-	-
	Lan14g0010	471	Gene3D	alpha/beta hydrolase	41	299	IPR029058	-
	Lan14g0010	471	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	27	470	IPR001563	GO:0004185\|GO:0006508
	Lan14g0010	471	SUPERFAMILY	alpha/beta-Hydrolases	45	468	IPR029058	-
	Lan14g0010	471	Gene3D	-	324	360	-	-
	Lan14g0010	471	ProSitePatterns	Serine carboxypeptidases, histidine active site.	435	452	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan14g0010	Lan-Chr14	169258	179427	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan14g0010	293	468	Calmodulin-binding Proteins	AT2G22960	26.486	5.51e-14	68.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan14g0010	K16297		-	gmx:100785391	805.053