Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0009 ATGGAAGCTAGTGCTGGACTAGTTGCTGGCTCTCACAACCGCAATGAGCTTGTGGTTATTCATGGCCATGAAGAGCACAAGCCATTGAAGAACTTGGATGGTCAGGTGTGTGAGATTTGTGGGGATGGGGTGGGACTCACGGTGGATGGAGACTTGTTTGTGGCCTGTAATGAGTGTGGTTTTCCGGTGTGTCGGCCGTGCTATGAATATGAAAGGAGAGAGGGGAGCCAACTTTGCCCACAGTGCAAGACTAGATACAAGCGTCTCAAAGGGAGCCCGCGGGTTCAGGGAGATGAAGATGAAGAGGATGTGGATGATATCGAGCATGAGTTTAATATTGAGGATCAAAAGAACAAGCATGGGTATGTTGCAGAAGCCATGCTGCATGGAAAGATGAGCTATGGAAGAGGTCCTGAAGATGATGAGCATTCTCAATTCCCACCTGTAAGTGGAGAGTTATCAGTAGCATCTCATGGTTATGGGGACCAGATGTTAGCTTCTTCGTTGCATAAACGAGTGCATCCATATCCAATGTCTGAACCAGGAAGTGCAAGATGGGATGAAAAGAAAGAGGATGGATGGAAAGACAGAATGGATGACTGGAAATTGCAGCAGGGAAATTTAGGACCTGAACCTGAAGAAGATCCAGATTCAGCTATGTTAGATGAAGCAAGGCAGCCACTGTCAAGGAAAATTCCAATAGCATCTAGCAAAGTCAATCCGTATAGGATGGTGATTGTGGCACGGCTCGTTATTCTTGCTTTCTTCTTTCGATACAGAATTTTGAACCCGGTACATGATGCAATGGGACTATGGCTAACCTCTATTGTATGTGAAATCTGGTTTGCTTTTTCATGGATTCTTGATCAGTTTCCTAAATGGTTTCCCATTGAACGAGAAACCTACCTTGATCGTCTTTCCATCAGGTACGAGCGCGAAGATGAACCCAATATGCTTGCTCCTGTGGATGTCTTTGTTAGTACTGTGGATCCAATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTTTCAATCTTGGCCATGGACTACCCAGTTGAAAAGATATCATGCTATATTTCTGATGATGGAGCTTCAATGTGCACATTCGAATCCCTATCAGAAACTGCAGAGTTTGCTAGGAAGTGGGTACCATTTTGTAAGAAATTTTCTATAGAGCCTAGAGCACCTGAGATGTACTTCTCTGAGAAGATTGACTACCTAAAGGACAAGGTGCAACCCACATTCGTTAAGGAGCGTCGAGCTATGAAGAGAGAATATGAAGAGTTCAAGGTTAGGATCAATGCACTTGTTGCAAAAGCGCAGAAAGTTCCTGAAGGAGGGTGGATCATGCAGGATGGAACACCATGGCCAGGGAACAACACCAAGGATCATCCTGGCATGATTCAAGTCTTTCTTGGCACCAGTGGAGGTCTTGATACTGAAGGAAACCAACTTCCTCGCCTTGTCTATGTTTCACGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCAATGAATGCTCTGGTTCGTGTGTCTGCAGTTCTCACAAATGCTCCTTTCATGTTGAACTTGGATTGTGATCATTATGTCAATAACAGCAAGGCTGCCCGGGAGGCCATGTGCTTCTTGATGGACCCGCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAAAGATTTGATGGCATCGATACACATGATCGTTATGCTAACAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCAGTATATGTTGGCACAGGTTGTTGCTTCCGGAGGCAAGCTTTATATGGGTATAATCCTCCGAAGGGTCCCAAGCGCCCAAAAATGGTAAGCTGTGACTGCTGCCCATGTTTTGGAAGCCGGAAGAAGCTTAAGCATGCAAAGAGTGATGCAAATGGAGAGGCTGCAAGCCTACAAGGAATGGATGATGACAAAGAGATGTTGATGTCTCATATGAATTTTGAGAAGAAATTTGGGCAATCATCGATCTTTGTGACTTCAACCTTGATGGAAGAGGGTGGTGTACCTCCATCTTCAAGTCCAGCAGGCCTTCTTAAAGAAGCCATTCATGTAATCAGTTGTGGGTACGAAGACAAAACTGAATGGGGACTAGAGCTTGGTTGGATCTATGGATCTATCACAGAGGATATTCTAACAGGTTTTAAGATGCACTGCCGTGGTTGGAGATCCATTTACTGCAATCCAAGGAGAGCTGCATTCAAGGGAACTGCTCCTATCAACCTGTCCGATCGTCTCAATCAGGTTCTTCGATGGGCACTTGGTTCCATTGAGATATTCTTCAGTCACCATAGCCCTTTATGGTATGGATACAAGGAAGGGAAACTAAAGTGGCTTGAGAGATTTGCATATGCAAACACAACTGTCTACCCCTTCACCTCCATAGCTCTAGTTGCCTACTGTATTCTTCCTGCAGTTTGCTTGCTTACTGACAAATTCATCATGCCACCGATAAGTACTTTTGCTGGTTTGTACTTCATTGGTCTCTTCTCTTCAATCATCGCAACAGGCATTCTCGAGTTGAAATGGAGTGGAGTAAGCATTGAGGAATGGTGGAGAAATGAACAATTTTGGGTCATTGGTGGTGTATCAGCACATCTATTTGCTGTTATACAAGGCCTTCTCAAGGTTCTAGCAGGAATTGACACCAACTTCACTGTTACATCAAAAGCAACAGATGATGAAGACTTTGGAGAATTATATGCATTTAAATGGACCACTCTCCTAATTCCTCCAACAACTATCTTAATAATCAATATTGTTGGAGTTGTTGCTGGAATCTCAGATGCTATAAACAATGGTTATCAATCTTGGGGGCCTCTATTTGGAAAACTTTTCTTTTCATTTTGGGTGATTGTTCATCTTTATCCATTCCTTAAAGGTTTGATGGGTAGGCAAAATCGGACGCCGACGATCGTAGTGATTTGGTCAATTCTATTGGCTTCAATTTTCTCATTGCTATGGGTAAGAATTGATCCATTTGTAATGAAGACAAAGGGACCTGATACAAAGCTATGTGGAATCAACTGCTGA 3093 0.4368 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDGVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVQGDEDEEDVDDIEHEFNIEDQKNKHGYVAEAMLHGKMSYGRGPEDDEHSQFPPVSGELSVASHGYGDQMLASSLHKRVHPYPMSEPGSARWDEKKEDGWKDRMDDWKLQQGNLGPEPEEDPDSAMLDEARQPLSRKIPIASSKVNPYRMVIVARLVILAFFFRYRILNPVHDAMGLWLTSIVCEIWFAFSWILDQFPKWFPIERETYLDRLSIRYEREDEPNMLAPVDVFVSTVDPMKEPPLVTANTVLSILAMDYPVEKISCYISDDGASMCTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPEGGWIMQDGTPWPGNNTKDHPGMIQVFLGTSGGLDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCCFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKLKHAKSDANGEAASLQGMDDDKEMLMSHMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGLLKEAIHVISCGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCNPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHSPLWYGYKEGKLKWLERFAYANTTVYPFTSIALVAYCILPAVCLLTDKFIMPPISTFAGLYFIGLFSSIIATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLLWVRIDPFVMKTKGPDTKLCGINC* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0009 1030 Pfam Cellulose synthase 322 1024 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan14g0009 1030 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Lan14g0009 1030 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Lan14g0009 1030 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 1 1030 - -
Lan14g0009 1030 Coils Coil 420 440 - -
Lan14g0009 1030 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 475 613 IPR029044 -
Lan14g0009 1030 SUPERFAMILY RING/U-box 21 107 - -
Lan14g0009 1030 SUPERFAMILY Nucleotide-diphospho-sugar transferases 335 803 IPR029044 -
Lan14g0009 1030 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Lan14g0009 1030 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1030 - -
Lan14g0009 1030 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0009 Lan-Chr14 133809 140168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0009 1 1030 Cell Wall Biosynthesis AT5G17420 85.618 0.0 1832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0009 K10999 - gmx:100815436 2024.59