Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0008 ATGGAAGCTAGTACTGGACTATTTACAAGTTCTCATGACAGCAATGAGCTCGTGGCAATCCAAGGACATGATGAGCCTAAGCTTGTGAAGAACTTAGATGGTCAACTATGTGAGATATGTGGTGATTCTGTGGGAGTAACAGTGGATGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGTTTCCCAGTGTGTAGGCCATGCTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGTCCTCAGTGCCATACAAGATACAAACGTATTAAAGGAAGCCCAAGAGTTGATGGAGATGAAGATGAAGATGATGTGGATGATATTGAACAAGAATTCAAAATGGTAGAAGAAAAGTACAAGCTTAAGCATGGTGAGATTCTGCCAGGAAAGAAAAGCAGTGGAGATGATTATGAGAATGCTAAATCAACACTGGTCAATGAAGATCTTCCAATATCTTCTTATAGTATAGGAGAACCTGGACGTGTGAAATTGGATGACAAGGTGAGAACACATGATTGGAAGTTGAACCAAGGCAATCTTTTGATTGAAACTGATGCCTCAGATGATCCTGAAAAGGCCATGAAAGAAGAAACTAGGCAGCCACTCTCAAGGAAAGTAGCGATACCGTCAGGCAAACTCAGTCCTTATAGAATGATGGTTGTGGCTCGGCTCATCATTCTACTACTTTTCTTTCAGTATAGAATCTTCCACCCGGTATCCGATGCGGTTGGACTATGGATCACATCTGTAGTATGTGAAATCTGGCTTGCATTGTCATGGCTAGTTGATCAGCTTCCTAAATGGTTTCCCATTGATCGTGAGACATACCTTGATCGTCTTTCTATCAGGTTTGAACCAGAGAACAAACCCAATATGCTTTCTCCAATAGATGTTTTTGTCACTACCATAGATCCAATCAAGGAACCTCCTATAGTTACAGCCAATACTGTTCTATCAATATTGGCCTTGGATTACCCGGCGGACAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCTGAATTTGCAAGAAAGTGGGTACCTTTCTGCAAAAAATTCTCTACAGAACCTCGAGCACCCGAGAAGTACTTCTCTGAGAAGATAGATTATCTGAAGGATAAGCTTCAGCCCACATATGTCAAAGAACGCCGTACGATGAAGAGAGAATATGAAGAATTTAAGGTGAGGATAAATGCACTTGTGGCCAAATCAAAGAGAGTTCCCGCAGAAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAATGCCAAAGATCATCCTAGTATGATACAAATACTTCTTGCTCACGGTGGAGGCCAAGAAGGAAATGAACTTCCCTGCCTTGCCTATATGTCTCGCGAGAAAAGACCCGCATTTCAACACCACAGCAAAGCTGGTGCAATGAATGCTTTGCTTCGCGTATCAGCAGTGCTAAGCAATTCTCCTTTTGTGCTGAACTTGGATTGTAATCATTACGTGAATAACAGCAAAGCCGTGCGAGAGGCTATGTGTTTCTTTATGGACATACAACTCGGGAATAGCATTGGTTTTGTCCAGTTTCCACAAAGATTTGACAGCCTTGATCGGAATGATCGTTATGCCAACAAAAACACTGTTTTATACGATATTACAATGAGATGCCTAGATGGAATTCAGGGGCCTGTTTATGTTGGTTCAGGATGTATCTTCAGAAGGAAAGCTTTATATGGCTTTGATCCTCCAAAGGCTTCAAAACGGCCGCGATTGGTACAAGTTCACTCAAAGCAAGATGAGGATGTAGATGATGCAAGCATAACAGTCACAGGAGCAGATGAAGATAACAAGCAACTATTGAAGTCAGAGATGAATTTTGAAAGTAAATTTGGAAAGTCTGAACTTTTTGCTAATTCTTCATTAACAGAAGAAGGTGGTATTGATCCTTCTTCAGGTCAGGCAGCCCTACTTAAAGAAGCCATTCATGTCATGAGTTGTAGCTATGAAGATAGAACTCTATGGGGATATGAGGTAGGATTGAACTATGGATCTATAGCATCTGATATTCTGACCAGTCTGAAGATACATACCCATGGCTGGAGATCTATATACTGCATGCCAAAGAGGCCTGCATTCAGGGGTACAGCTCCTATAAACCTTACAGATAGACTTAACCAAGTGCTTAGATGGGCAGTGGGATCACTTGAGATCCTATTCAGCCACCATTGTCCAATCTGGTATGGCTTCAATGAAGGAAGACTCAAAGGGCTTCAAAGGATTGCATATATTAACAGCACTGTCTACCCTTTCAGCTCAATACCTCTCCTCATATATTGTCTCATTCCTGCCATCTGCTTGCTCACTGATAAATTCATCATATCTTCGGTAGGAACTCTAGCAGGTTTAATCTTCATTTCTTTGTTCCTCTCAATCTTGGCATCAGCAATTCTTGAAGTAAGATGGAGTGGAGTTAGCCTTGAAGAATGGTGGAGAAATCAGCAATTCTGGGTCATTGGCAGTGTGTCTGGACACCTATTTGCCATTATACAAGGCCTTATGACAGCATTTTCTAAATTCAACACAAACTTGAGTGTTGTATCAAAGGCACCAAATGATGATGGAGAGTTTCATGAACTATACACAATTAAATGGACTGCACTTCTAATACCTCCAACCACAATCATAATAGCCAACATTATTGGTATTGTAGCTGGTTTCACTGATGCAATGAATAGTGGTGAACATTCTTGGGGTGCACTTCTTGGTAAACTCTTCTTCTCTTTGTGGGTTATTGTTCATATGTATCCATTCCTCAAAGGTTTGATGGGTAGACAGAACAGGACACCAACTCTTGTTGTTATATGGTCAGTGCTTTTAGCTTCAATCTTCTCATTGGTTTGGGTTAGAGTTGACCCTTTTGTGTTGAAAACAAAGGGTCCTGATGTCAAGCAATGTGGAATCAGTTGTTGA 2979 0.4126 MEASTGLFTSSHDSNELVAIQGHDEPKLVKNLDGQLCEICGDSVGVTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVDGDEDEDDVDDIEQEFKMVEEKYKLKHGEILPGKKSSGDDYENAKSTLVNEDLPISSYSIGEPGRVKLDDKVRTHDWKLNQGNLLIETDASDDPEKAMKEETRQPLSRKVAIPSGKLSPYRMMVVARLIILLLFFQYRIFHPVSDAVGLWITSVVCEIWLALSWLVDQLPKWFPIDRETYLDRLSIRFEPENKPNMLSPIDVFVTTIDPIKEPPIVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSTEPRAPEKYFSEKIDYLKDKLQPTYVKERRTMKREYEEFKVRINALVAKSKRVPAEGWTMKDETPWPGNNAKDHPSMIQILLAHGGGQEGNELPCLAYMSREKRPAFQHHSKAGAMNALLRVSAVLSNSPFVLNLDCNHYVNNSKAVREAMCFFMDIQLGNSIGFVQFPQRFDSLDRNDRYANKNTVLYDITMRCLDGIQGPVYVGSGCIFRRKALYGFDPPKASKRPRLVQVHSKQDEDVDDASITVTGADEDNKQLLKSEMNFESKFGKSELFANSSLTEEGGIDPSSGQAALLKEAIHVMSCSYEDRTLWGYEVGLNYGSIASDILTSLKIHTHGWRSIYCMPKRPAFRGTAPINLTDRLNQVLRWAVGSLEILFSHHCPIWYGFNEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFIISSVGTLAGLIFISLFLSILASAILEVRWSGVSLEEWWRNQQFWVIGSVSGHLFAIIQGLMTAFSKFNTNLSVVSKAPNDDGEFHELYTIKWTALLIPPTTIIIANIIGIVAGFTDAMNSGEHSWGALLGKLFFSLWVIVHMYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0008 992 Coils Coil 393 413 - -
Lan14g0008 992 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 284 388 IPR029044 -
Lan14g0008 992 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 444 584 IPR029044 -
Lan14g0008 992 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Lan14g0008 992 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Lan14g0008 992 Pfam Zinc-binding RING-finger 29 104 IPR027934 -
Lan14g0008 992 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 992 - -
Lan14g0008 992 SUPERFAMILY Nucleotide-diphospho-sugar transferases 306 807 IPR029044 -
Lan14g0008 992 PANTHER CELLULOSE SYNTHASE 1 992 - -
Lan14g0008 992 Pfam Cellulose synthase 295 986 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan14g0008 992 SUPERFAMILY RING/U-box 22 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0008 Lan-Chr14 126322 132429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0008 1 992 Cell Wall Biosynthesis AT5G17420 64.763 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0008 K10999 - gmx:100777270 1603.57