Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0003 ATGCCTGAATTAGCGAACCTTTCTCTTCCTTCTCCAATTCTCTCTCTCAGTAACTGCTCCAACAACCTCAACCAACCTCTTCCTCAGCTTCAACAATCTCCACGCTCCGATTTCAATTCCCGGTCTAGTTCTCAAACCCTAGCACTCGGTCACGATTCTGACCGGGACTTCCGGTTCCCGGTTAAGGGAGACGGTGTCGATGAAGGAGGTGAATCTGAACCTCGAGTTTTGAAACGAGCTCGAGGTTCAGTGGATCTGGTTAGGAAGAGAGCTGGTGCTGATAAGAGCTTCCAGGATCGAATTAAAGATCCATCTTCTCTTCCGTTCCTTGTTGGAGCTCCTAAAGAGGTTGATTGTTCCTTTTGTCAACGTTTTGTGAACCCTGGAGAGGAGATATCATGTTCTGTTCGTGGATGTGGGACATGCTACCATAAGGAATGTGCTAAAGAAGCTGGTGGGATTTTGAATAAGAACAAATTCAAGTGCCCACAACATGCATGCTTCCTCTGCAAACAAAAATTGCACTTGTTGCGGTGTGTGCGTTGCACAATGGCATTCCATCATAAATGTGCACCATGGCCAGATGAAGTGGTGCATCTAAAAGATCATCCTGGACAAGCTGTATGTTGGAAGCATCCTTCTGACTGGCGCCTAGATAGAAAGCCAGAGGCTTCAACAAGTGCCATTCCGGATCTTCCTCTGCCCTATATCAAGGAGGAGTTTAAGATTGACCTCACATGGAAAGACATGGACAGTAAGATGGAGCCACCACCATATATACACATAAGGCGCAATATATACCTAGTGAAGAAGAAGCGCAGTGATGCAGATGATGGTGAAGGGTGCACTAGTTGCAGTTCTACGTGCTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTTGTCGCTGCTCAGAAAATTGCAACAATCGACCATTTCGCAAGGAGAAAAGGATCAAGCTTGTCAAGACTGAACTTTGTGGATGGGGAGTAGAGGCCGTGGAAGCAGTCGATAAGGGTGGATTTATTATTGAGTATATTGGAGAAGTCATTGATGATGCTTTATGTGAAAAAAGGCTCTGGGACATGAAAGACAAGAATGTACAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTAAATCACAGCTGTGACCCCAATTGTGTTTTGGAAAAATGGCAAGTTGATGGGGAAACACGTGTTGGTGTATTTGCTGCCCGTTCAATAGAAATCGGAGAACCATTGACGTATGATTACAGGTTTGTGCAATTTGGTCCAGAGGTGAAATGCCACTGTGGTGCTGCAAATTGTCAAGGCTTTCTAGGGACAAAAAAGAAAATTGGCAAGGTAGAAATAGAACTTCATTGGGGCTCAAAACGGAAGCGATTGTCAAAAGTTTATGTTAAGAAAACCACAGGTGAATGA 1479 0.4422 MPELANLSLPSPILSLSNCSNNLNQPLPQLQQSPRSDFNSRSSSQTLALGHDSDRDFRFPVKGDGVDEGGESEPRVLKRARGSVDLVRKRAGADKSFQDRIKDPSSLPFLVGAPKEVDCSFCQRFVNPGEEISCSVRGCGTCYHKECAKEAGGILNKNKFKCPQHACFLCKQKLHLLRCVRCTMAFHHKCAPWPDEVVHLKDHPGQAVCWKHPSDWRLDRKPEASTSAIPDLPLPYIKEEFKIDLTWKDMDSKMEPPPYIHIRRNIYLVKKKRSDADDGEGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKRIKLVKTELCGWGVEAVEAVDKGGFIIEYIGEVIDDALCEKRLWDMKDKNVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEIGEPLTYDYRFVQFGPEVKCHCGAANCQGFLGTKKKIGKVEIELHWGSKRKRLSKVYVKKTTGE* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0003 492 MobiDBLite consensus disorder prediction 24 50 - -
Lan14g0003 492 SMART PostSET_3 444 460 IPR003616 -
Lan14g0003 492 Gene3D SET domain 237 478 IPR046341 -
Lan14g0003 492 SUPERFAMILY SET domain 240 450 IPR046341 -
Lan14g0003 492 SMART PHD_3 167 213 IPR001965 -
Lan14g0003 492 SMART PHD_3 118 166 IPR001965 -
Lan14g0003 492 ProSiteProfiles SET domain profile. 321 438 IPR001214 GO:0005515
Lan14g0003 492 Pfam SET domain 332 437 IPR001214 GO:0005515
Lan14g0003 492 ProSiteProfiles AWS domain profile. 278 321 IPR006560 GO:0005634|GO:0018024
Lan14g0003 492 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 101 488 - -
Lan14g0003 492 ProSiteProfiles Post-SET domain profile. 444 460 IPR003616 -
Lan14g0003 492 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 492 IPR025787 -
Lan14g0003 492 PANTHER SET DOMAIN PROTEINS 101 488 - -
Lan14g0003 492 MobiDBLite consensus disorder prediction 24 73 - -
Lan14g0003 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 216 IPR013083 -
Lan14g0003 492 SMART set_7 321 444 IPR001214 GO:0005515
Lan14g0003 492 CDD SET_ASHR3-like 322 460 - -
Lan14g0003 492 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0003 Lan-Chr14 27968 36249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0003 302 459 C2H2 Transcription Factor Family AT2G23740 37.778 9.51e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan14g0003 SET 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0003 - - aprc:113859744 686.797