Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1212 ATGGTTCAGCTGGTTATTTCTGTTTCTTTATTTACATTTACTGATGTTAGCATTTCAAGAGATTTGAGACCAATAATGTATTCATTTCACTGTTATGGTTATGGCATTTCTTTCAATTTATCCATTTGTTTTTTCTTACAGAATACTGTAATGCCGGGTCTGAGAATCCATGGATATGCCTTGGCTGTTTTGTTCTGTTTTATCATTTTGGTAGCAGCCTCACAAAGAATACACCCTTCTGAAGGAAATGCACTAATTGAAATCAAGAAAAGTTTGATTGATCCCAAGGGAAACCTGAGGAACTGGAATAAGGGTGATCCGTGTGTATCAAACTGGACTGGAGTTTGGTGTTTTGATAAGGTTGGTGATGATGGGTACTTCCATGTCCAGGAACTCTACTTCATGACTTTGAATCTCTCCGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCTCATCTTGAGATTCTGAATTTCATGTGGAATAATCTGACAGGCACCATACCAAAGGAGATTGGAAATCTTACATCATTGACACTCTTGCTCCTGAATGGCAATAACTTATCTGGTACTTTACCAGATGAGCTTAGCAACCTGTCGAATTTGAGTAGACTACAAGTTGATGAAAACCAATTGTCGGGTCCTATTCCGGAGTCATTTGCAAACTTGATCAATGTTATACACCTCCACATAAACAACAACTCTTTCAGTGGTCAAATTCCACCTAACCTTTCAAAGCTACCCAATCTAATGCACTTGCTTGGGGACAACAATAACTTATCAGGCTATCTTCCACCAGAGTTCTCTACGCTAAAGAATTTGCGCATACTCCAACTTGATAACAATAATTTCAGCGGGACTGGAATTCCTTCTACCTATGCAAACTTATCTATGCTAGTAAAACTAAGTCTAAGAAACTGTGGTTTGCAAGGAGCTATTCCAGATTTCAATTCAATACCAGAACTTAGCTATTTAGATCTTAGCCGGAATCTTTTTATCGGACACATACCATCAAATAAACTTTCAGACAACATGACGACTATTGATCTGTCCAATAATTATCTCAATGGATCTATTCCTCAAAGCTTCTCATATCTTCCTCATCTTCAAAAATTGTCACTTGAGAACAATAACTTGTCAGGGTTCATCCATGCTAGCATATGGCAGAACATTACCTTCAGTATGAATTCTAAACTTTTAATCGACCTCCGTAACAACTCACTCTTAGACGTATCGGGAAGTCTGAACCCGCCAGCAAATGTCACCTTGAGGCTTTCCGGAAATCCTATTTGCAAGAATTCTAACATGCAAAACATTGGTGAATATTGTGAACTGGAAGAACATGTTTCCAAAGAGCAAGCAAATTCAACGCTTGTCTGTCCAGTTCAAGCTTGTCCAATGGATAATTTCTATGAATATGCTCCCTCTTCTCCGGTTCCTTGCTTTTGCGCAGCGCCTCTAAGAATTGGATATAGGCTGAAAAGTCCAAGTTTTTCTTACTTCCCTCCATATAGAACTTATTTTCAATCTTATATAACTCAGTCCTTGAACATAGCCTTCTATCAATTATCAATATATACTCATGCATGGGAAGAGGGACCCCGTATCAATATGTATTTAAAAATCTTTCCTAAGTACAATGATTCACACTCTAGTGTGTTCAATGAGAGTGAAGTCCGTCGCATTGAAGGCATATTTACATCATGGAAGTTTCCTCGCACCGATTTTTTTGGACCGTACGAACTCCTCAACTTCACTCTTCTGGGACCTTATGAACATCTAATTAATGATTCAGAGAGGAGTAAAGTTAGCAAAGGTGTATTAGTTGCTGTTATACTCGCAGCTGTTGCTTTTGTTTTAGCAATATGTGCAATAATTCTTCTCCTGATTTCTAGAAGACGTATCAAATACTTCCACAAGCTTCCCAACAAATCATCTAGCATATCTATCAAGATAGATGGTCTGAAAGCATTTACTTTTAAAGAATTAGCTCATGCTACTAACAAATTCAACAGTACAAATAAAGTTGGCCGAGGAGGTTATGGAATTGTTTATAAAGGCATTTTATCTGATGAAACATTTGTGGCCGTAAAGCGAGCAGAAGAAGATTCCTTACAAGGCCAAAAAGAGTTCTTGACAGAGATTGAGCTTTTATCAAGGTTACATCATCGAAATCTTGTCTCCTTGATTGGATACTGCAATGAAGCAGGAGAACAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTCAGGGACTGGATTTCCGCAGATAAAAGTGAAAAGAAGGAAAGCTTAAGTTTTGGTATGAGGCTGCAAATTGCAAAGGGTGCAGCCAAAGGCATACTATATCTACATACAGAGGCCAACCCTCCTATATTCCACCGTGATATTAAAGCCAGTAACATACTTTTGGATTCCAATTTTATTGCTAAAGTGGCTGATTTTGGACTGTCACGGCTTGCACCATACCTAGATGATGAAGGAGATTTTCCAAAACATGTGTCTACAGTTGTGAAAGGAACACCAGGTTACCTGGATCCGGAATACTTGTTGACTCATAAGTTGACAGACAAATGTGATGTATATAGCCTTGGAATTGTGTATCTAGAGCTTTTGACAGGCATGCAACCAATATCACATGGAAAAAACATTGTTCGTGAGGTTAATGTGGCTCGTGAATCAGGCATGATATATTCCATAACAGACAAAAAAATGGGTTTCTATCCATCTGAATGTTTGGACAAGTTTTTATCTCTAGCCCTTAGTTGCTGCCAAGACAATCCAGAGTTGAGACCATCAATGCTAGATGTTGTGAGGGAACTAGAAGATATTATTGCAATGTTGCCAGAAACTTATTATACTTGTATTTTCTCAGACATAACAACAGATAATTCTGGTAAAGTAGCACCTTCATCTTCATCATTGGCTTCAGCATCATCTAATGTGACTAGGGAGGACCAACAACAATACATGTCTTCATATGTGTTAGGAAGTGATCTTGTTAGTGGTGTTGTTCCCACCATTGTTCCTCGCTAG 3036 0.3857 MVQLVISVSLFTFTDVSISRDLRPIMYSFHCYGYGISFNLSICFFLQNTVMPGLRIHGYALAVLFCFIILVAASQRIHPSEGNALIEIKKSLIDPKGNLRNWNKGDPCVSNWTGVWCFDKVGDDGYFHVQELYFMTLNLSGSLAPQLGQLSHLEILNFMWNNLTGTIPKEIGNLTSLTLLLLNGNNLSGTLPDELSNLSNLSRLQVDENQLSGPIPESFANLINVIHLHINNNSFSGQIPPNLSKLPNLMHLLGDNNNLSGYLPPEFSTLKNLRILQLDNNNFSGTGIPSTYANLSMLVKLSLRNCGLQGAIPDFNSIPELSYLDLSRNLFIGHIPSNKLSDNMTTIDLSNNYLNGSIPQSFSYLPHLQKLSLENNNLSGFIHASIWQNITFSMNSKLLIDLRNNSLLDVSGSLNPPANVTLRLSGNPICKNSNMQNIGEYCELEEHVSKEQANSTLVCPVQACPMDNFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFPPYRTYFQSYITQSLNIAFYQLSIYTHAWEEGPRINMYLKIFPKYNDSHSSVFNESEVRRIEGIFTSWKFPRTDFFGPYELLNFTLLGPYEHLINDSERSKVSKGVLVAVILAAVAFVLAICAIILLLISRRRIKYFHKLPNKSSSISIKIDGLKAFTFKELAHATNKFNSTNKVGRGGYGIVYKGILSDETFVAVKRAEEDSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEAGEQMLVYEFMPNGTLRDWISADKSEKKESLSFGMRLQIAKGAAKGILYLHTEANPPIFHRDIKASNILLDSNFIAKVADFGLSRLAPYLDDEGDFPKHVSTVVKGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMQPISHGKNIVREVNVARESGMIYSITDKKMGFYPSECLDKFLSLALSCCQDNPELRPSMLDVVRELEDIIAMLPETYYTCIFSDITTDNSGKVAPSSSSLASASSNVTREDQQQYMSSYVLGSDLVSGVVPTIVPR* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1212 1011 Pfam Leucine rich repeat 319 378 IPR001611 GO:0005515
Lan13g1212 1011 CDD STKc_IRAK 675 944 - -
Lan13g1212 1011 Gene3D Ribonuclease Inhibitor 78 239 IPR032675 -
Lan13g1212 1011 Gene3D Ribonuclease Inhibitor 337 466 IPR032675 -
Lan13g1212 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Lan13g1212 1011 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Lan13g1212 1011 Gene3D Ribonuclease Inhibitor 240 336 IPR032675 -
Lan13g1212 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 62 977 - -
Lan13g1212 1011 SUPERFAMILY Protein kinase-like (PK-like) 654 970 IPR011009 -
Lan13g1212 1011 Pfam Leucine rich repeat N-terminal domain 79 117 IPR013210 -
Lan13g1212 1011 SMART serkin_6 669 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1212 1011 SUPERFAMILY L domain-like 94 438 - -
Lan13g1212 1011 Gene3D Transferase(Phosphotransferase) domain 1 745 952 - -
Lan13g1212 1011 SMART LRR_typ_2 270 294 IPR003591 -
Lan13g1212 1011 SMART LRR_typ_2 222 246 IPR003591 -
Lan13g1212 1011 SMART LRR_typ_2 174 198 IPR003591 -
Lan13g1212 1011 SMART LRR_typ_2 365 389 IPR003591 -
Lan13g1212 1011 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 62 977 - -
Lan13g1212 1011 ProSiteProfiles Protein kinase domain profile. 669 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1212 1011 Gene3D Phosphorylase Kinase; domain 1 640 744 - -
Lan13g1212 1011 Pfam Protein kinase domain 670 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1212 Lan-Chr13 17713938 17720878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1212 55 1011 Receptor kinase-like Gene Family AT5G01950 60.644 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan13g1212 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1212 - - lang:109325183 1966.81