Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1206 ATGAGTCCTGATCAACCTCTTCTTTCCCAAACACCTCTTCCCCTTTCTTCTTCTTCTTCTTCTTCTCAGATCCGTTACCGTAACAGATCCACTTCCTTTGACGACTTCACTAACGATAACGTCATCCATCACAACAACGACGTCGTTTTACTCTCTCACTCTAATTTCCCCCTTCACCAACAACAACACCAACAACAACATCAACGTTCTTCTTCCCTCGACAACCACACCAACGACGTCGTTTTACACACCGAATGCTCTTCAACACGAATGGTATCATTTGCTGCAATGGAAATGCAGCAACTTAATGATACCAATAATAATAACAATAACACGACACCGTTTCAAATCTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCCTAACCCTAACAATACGACGCCGTTTCACAAACCCTATCACAATCGTCACAAGAGCGTGCAATTCGAGGATCCGATTCTACACGAAGATTCATCGCCAAGGTTGATTTACATAAATGACCCTAAGACAACGAATGATAAGTATGATTTCACAGGGAATGAAATAAGGACGAGTAAATACACAGTTCTCACGTTTTTACCCAAGAATCTCTTCATTCAATTTCATCGTGTTGCGTATTTGTATTTCCTCGCTATTGCAGCACTTAATCAGCTTCCTCCATTGGCTGTGTTTGGAAGAACAGTTTCACTTTTCCCCTTATTGTTTGTCCTATGTGTTACCGCTATTAAGGATGGGTATGAGGATTGGCGGAGGCATCGGTCGGATCGTAATGAGAACAATCGAGAGTCTCTGGTGCTTCAATTTGGGGATTTTAGGTCGAAGAAGTGGAAAAACATAGAAGTTGGCGAAGTTGTTAAGATTTTCGCCGATGAGACAATTCCAGCAGATATGGTGTTGTTGGGGACGAGTGATCAGAGCGGGCTTGCATATATTCAGACAATGAATTTGGATGGAGAGTCGAATTTGAAAACTAGGTATGCTAAACAGGAAACAACTTCGGCAGTTTCGTCTGAAGTTTGTAATGTATGTGGGGTCATTAGATGTGAGCCACCAAACCGGAATATTTATGAGTTCACCGCAAATATGGAGTTCAATGGGGTTAAGTTTTCACTAAGCCAATCGAACATTGTGTTGCGCGGTTGCCAGCTTAAGAACACAGATTGGATCATTGGTGTTGTTGTTTATGCAGGACAGGAAACAAAAGCAATGATGAACAGTGCAATTTCACCTTCAAAAAGAAGCAGATTGGAAACTTATATGAACAGGGAAACACTTTGGTTGTCTATTTTTCTGTTTATAATATGTTTAGTTGTGTCCACTGGGATGTGTCTTTGGCTTGTTCGTCACAAGGACCAGATTGATACATTGCCCTACTACAGAAAAAGATACTTCAATGATGGACCAGATAATGGAAAGAGATATAAGTTCTATGGGATCCCAATGGAAGCTTTTTTCTCATTTTTGAGTTCTGTTATCGTGTTTCAGATAATGATACCGATATCTCTTTACATTACAATGGAGTTGGTTCGTTTGGGACAGTCATACTTCATGATTGAAGATGGTGACATGTATGATGCTTCATCTGGATCAAGATTTCAGTGTAGGTCTTTGAACATAAATGAAGATTTGGGCCAAATACGCTATATATTTTCAGACAAGACAGGAACATTAACAGAAAACAAAATGGAATTCCGGAGAGCCAGTGTGCATGGGAAGAATTATGGGGGCTCCTTGCTTACGGCTGATAATAGTACAGCCGCAGCAGCTGTTATTCGTAAACGCAGATGGGAGCTAAAATCTGAAATTGCAGTTGATTCTGAACTGGTGACAATGTTGCATGAAGACTCAAACAGGGATGAAAGAATTGATGCTCATGAGTTTTTCCTTACATTAGCTGCATGTAATACTGTGATCCCTATACTTAATGGTGGTGGGGGGTTTTCCAGTGTTGCAACAAGTGAATCAAATGAAGATATAGTAGGCATTGATTACCAGGGAGAATCTCCGGATGAACAGGCTCTTGTTTCTGCAGCCTCTGCATATGGGTATACACTTTTTGAGCGAACATCTGGACATATTGTTCTGGACGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGCCTGCACGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTCGTTATTCGGTTTCCTAATAATGTTGTAAAGGTGCTAGTCAAAGGTGCTGATACCTCAATGTTTAGCATTTTAGCAAATGACAGTGAGACCAATAATAGGATACATCATGCAACAGAAGGCCATTTGAGTGAATATTCTTCAGTGGGTCTGCGCACTCTTGTAATTGCCTCCAGGGATCTTTCAGCTGCTGAACTTGAGAAGTGGCAAAATGCATATGAAGATGCAAGCACTTCGTTGACTGACAGAACTGCTAAACTACGTCAGACGGCATCTCTTATAGAGTGCAACTTAAAGCTGCTTGGAGCAACTGGAATTGAGGATAAGCTGCAAGAGGGTGTACCAGAAGCTATTGAGTCGCTGCGGCAAGCTGGGATCAAGGTCTGGGTTCTTACTGGTGATAAACAAGAGACAGCAATTTCAATTGGCCTTTCCTGCAAGCTTCTGACTCCAGATATGGAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGCAGAAATCTTTTGGGTGAAGCCAAAGACAAATATGGTGTTAGATCTTCAGACATTGGGAAAAAAAATCTCAAGCACAAAACAAATGCGGATATTTCCCATGATTCAATGTCATTGAGCTTGCCCAAGTGGAATCCAGTAAAGGAAGAAGGAATTACTGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAAGAACTGGAGCCAGAGCTTTTCGACCTTGCAACTACCTGTAGGGTTGTCCTTTGCTGTCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATATGATAAAGAGCCGCACAGATGATATGACACTGGCCATTGGCGATGGAGCCAATGATGTGTCAATGATCCAGATGGCAGATGTTGGTGTTGGAATATGCGGGCAGGAGGGACGCCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAATTTCGGTTCTTAAAAAAATTACTTCTGGTTCACGGCCACTTGAATTATCAGCGTGTTGGTTATTTAGTCCTGTACAACTTCTACCGCAATGCTGTCTTCGTACTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCCTTGACAGATTGGAGTAGTGTATTCTATTCTCTGATCTACACATCTGTACCTACAATTATTGTTGGTATTCTGGACAAAGACTTGAGTCATAAGACACTCTTGAAGTATCCAAAACTGTATTGTACAGGTCACCGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACTCCATTGCTCATCTATAAGGACAGCTCAATTGATATATGGAGCATGGGTAGTTTGTGGACGATTGGGGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATCAACCGTTGGGTATTGATTACTCATGCTGCTATATGGGGATCGATAATCATCACATATGGTTGCATGGTGGTAATTGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATATGGCAAGTTCCCCCACATACTGGATAACAATTTTGCTTATAATAATTGTGGCATTGATCCCTCGCTTTACTTGTAAAGTTGCTAGTCAAATTTTTTGGCCTTCGGATATCCAGATAGCTAGAGAATTTGAGTTAATTAGAAGGCGACAAGATCATCCAAGGTCAAGGCAGCAAGCTTCCACTTAA 3885 0.4111 MSPDQPLLSQTPLPLSSSSSSSQIRYRNRSTSFDDFTNDNVIHHNNDVVLLSHSNFPLHQQQHQQQHQRSSSLDNHTNDVVLHTECSSTRMVSFAAMEMQQLNDTNNNNNNTTPFQISSSSSSSSSNPNPNNTTPFHKPYHNRHKSVQFEDPILHEDSSPRLIYINDPKTTNDKYDFTGNEIRTSKYTVLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQFGDFRSKKWKNIEVGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETTSAVSSEVCNVCGVIRCEPPNRNIYEFTANMEFNGVKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSAISPSKRSRLETYMNRETLWLSIFLFIICLVVSTGMCLWLVRHKDQIDTLPYYRKRYFNDGPDNGKRYKFYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASVHGKNYGGSLLTADNSTAAAAVIRKRRWELKSEIAVDSELVTMLHEDSNRDERIDAHEFFLTLAACNTVIPILNGGGGFSSVATSESNEDIVGIDYQGESPDEQALVSAASAYGYTLFERTSGHIVLDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNVVKVLVKGADTSMFSILANDSETNNRIHHATEGHLSEYSSVGLRTLVIASRDLSAAELEKWQNAYEDASTSLTDRTAKLRQTASLIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMEQIIINGTSEVECRNLLGEAKDKYGVRSSDIGKKNLKHKTNADISHDSMSLSLPKWNPVKEEGITAPLALIIDGNSLVYILEKELEPELFDLATTCRVVLCCRVAPLQKAGIVDMIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKKLLLVHGHLNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSLIYTSVPTIIVGILDKDLSHKTLLKYPKLYCTGHRQEAYNMQLFWITMIDTVWQSLVLFYTPLLIYKDSSIDIWSMGSLWTIGVVILVNVHLAMDINRWVLITHAAIWGSIIITYGCMVVIDSIPVFPNYWTIYHMASSPTYWITILLIIIVALIPRFTCKVASQIFWPSDIQIAREFELIRRRQDHPRSRQQAST* 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1206 1294 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 141 1292 - -
Lan13g1206 1294 Gene3D - 547 559 IPR023214 -
Lan13g1206 1294 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 556 834 IPR023299 GO:0000166
Lan13g1206 1294 SFLD p-type atpase 534 1050 IPR044492 -
Lan13g1206 1294 PRINTS P-type cation-transporting ATPase superfamily signature 550 564 - -
Lan13g1206 1294 PRINTS P-type cation-transporting ATPase superfamily signature 1000 1019 - -
Lan13g1206 1294 MobiDBLite consensus disorder prediction 103 137 - -
Lan13g1206 1294 Pfam E1-E2 ATPase 263 508 - -
Lan13g1206 1294 MobiDBLite consensus disorder prediction 1 26 - -
Lan13g1206 1294 ProSitePatterns E1-E2 ATPases phosphorylation site. 552 558 IPR018303 -
Lan13g1206 1294 Gene3D - 533 546 - -
Lan13g1206 1294 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 970 1086 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan13g1206 1294 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 483 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan13g1206 1294 Gene3D - 818 1040 IPR023214 -
Lan13g1206 1294 SUPERFAMILY Calcium ATPase, transduction domain A 261 403 IPR008250 -
Lan13g1206 1294 Gene3D - 236 407 - -
Lan13g1206 1294 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 177 1275 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan13g1206 1294 MobiDBLite consensus disorder prediction 103 141 - -
Lan13g1206 1294 SFLD Haloacid Dehalogenase 534 1050 - -
Lan13g1206 1294 Gene3D - 560 575 IPR023299 GO:0000166
Lan13g1206 1294 Gene3D - 663 800 IPR023299 GO:0000166
Lan13g1206 1294 CDD P-type_ATPase_APLT_Dnf-like 179 1160 - -
Lan13g1206 1294 Pfam Cation transport ATPase (P-type) 659 742 - -
Lan13g1206 1294 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 141 1292 - -
Lan13g1206 1294 SUPERFAMILY Calcium ATPase, transmembrane domain M 178 1266 IPR023298 -
Lan13g1206 1294 Pfam Phospholipid-translocating P-type ATPase C-terminal 1028 1268 IPR032630 -
Lan13g1206 1294 Pfam Phospholipid-translocating ATPase N-terminal 163 228 IPR032631 -
Lan13g1206 1294 SUPERFAMILY HAD-like 545 1046 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1206 Lan-Chr13 17653987 17662203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1206 114 1286 Primary Pumps ATPases AT5G04930 55.715 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1206 K14802 - gmx:100812459 1988