Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1204 ATGGTTTCCTCTAGCTTTTCTGGTTTGACTTCGGCTCGTAAATACAAACCATTACAGAATCAGTTACTCCTTCCTGCTAGCCTTCCTAATACCATTGACACGGATAACATCGAGCTAGATTTTTCGGATGTCTTTGGTCCAGTTACTGTTCCAGCATCGGTAGAAGTGAATAACATCGACTCCTTTGCTGCTGAGTCTGTTGAAGAATCGAATGAATTGGTTTATGATGACCCAGAAGTCATTTACACTCGCTCACATTCTCTCGTTGGTCCTTCTACTTGTGTTAGTCAATCGTTTAAGCTTAGCAAACTCACCATACATGAGACTAAGGACTCATTGGAACTAGTGGAGCATGTCACCGGAGAGACCATTGACGAACTCCAAGAATCTTCCTTTAAAAATGTTATTGTTGAGGAATCTTTGAATGGTGAAGATGGAAATCTCATGAAGATTCAGAGAGTTAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAAGGTGCATTTGCTAAAGTATACCAAGTGAGGAAAAAGGGTACTTCTGAGATATATGCTATGAAGGTTATGCGGAAGGACAAAATTATGGAGAAGAACCATGCTGAGTACATGAAAGCTGAAAGGGATATTTTGACCAAAATAGAGCATCCATATGTTGTTCAACTCAGATACTCTTTTCAGACAAAATACCGATTATATCTTGTGCTGGATTTTGTAAACGGAGGTCATCTCTTCTTTCAGCTTTATCACCAGGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCCGAGATTGTTTCTGCAGTTTCACATCTCCATTCGAATGGGATTATGCACAGGGATCTGAAACCCGAAAATATCCTAATGGATGCTGATGGGCATGTTATGTTAACTGATTTTGGCTTAGCCAAACGATTCGAAGAGAGTACAAGATCTAATTCCATGTGTGGAACATTGGAGTACATGGCACCTGAAATTATTCTCGGCAAGGGCCACGATAAGGCTGCTGATTGGTGGAGTGTGGGCATCCTTTTGTTTGAGATGCTTACTGGAAAGCCGCCATTCTGTGGTGGGAACCGTGAGAAAATTCAGCAGAAGATAGTTAAAGACAGGATAAAACTGCCGACATTTTTGTCTAGTGAAGCACATGCTCTGTTGAAAGGGCTGCTACAAAAGGAGGCGTGTAAGCGGTTAGGTAATGGAGCTAAGGGGATTGAGGAAATCAAAGGCCACAAATGGTTCAAACCAATCAACTGGAATAAGTTGGATGCAAGAGAAATCCAACCAAGCTTTAGGCCTGAAGTTGCTGGGATGCACTGTGTTGCCAACTTTGAGAAGCGATGGACTGATATGCCTGTGGTGGACTCGCCGGCCACCAGTCCAAACGGTGGAAACCCCTTCAAGGACTTCTCGTATGTCCGACCTGCACCCTCTTTTCTTCAAAGGAATAGCCCAGCTTGCTAG 1467 0.4301 MVSSSFSGLTSARKYKPLQNQLLLPASLPNTIDTDNIELDFSDVFGPVTVPASVEVNNIDSFAAESVEESNELVYDDPEVIYTRSHSLVGPSTCVSQSFKLSKLTIHETKDSLELVEHVTGETIDELQESSFKNVIVEESLNGEDGNLMKIQRVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKIEHPYVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSNGIMHRDLKPENILMDADGHVMLTDFGLAKRFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIVKDRIKLPTFLSSEAHALLKGLLQKEACKRLGNGAKGIEEIKGHKWFKPINWNKLDAREIQPSFRPEVAGMHCVANFEKRWTDMPVVDSPATSPNGGNPFKDFSYVRPAPSFLQRNSPAC* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1204 488 Pfam Protein kinase domain 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1204 488 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 486 - -
Lan13g1204 488 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 486 - -
Lan13g1204 488 ProSiteProfiles Protein kinase domain profile. 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1204 488 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524
Lan13g1204 488 Gene3D Transferase(Phosphotransferase) domain 1 239 434 - -
Lan13g1204 488 Pfam Protein kinase C terminal domain 440 473 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan13g1204 488 SMART pkinase_C_6 416 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan13g1204 488 CDD STKc_AGC 165 415 IPR045270 GO:0004674|GO:0005524
Lan13g1204 488 Gene3D Phosphorylase Kinase; domain 1 156 457 - -
Lan13g1204 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Lan13g1204 488 SMART serkin_6 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1204 488 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan13g1204 488 SUPERFAMILY Protein kinase-like (PK-like) 156 478 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1204 Lan-Chr13 17634809 17639382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1204 1 485 AGC Kinase Gene Family AT3G08720 68.443 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lan13g1204 Pkinase 1.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1204 K04688 - gmx:100804819 837.795