Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1202 ATGAGGAACAACAAAAACAACAACCTCAATTACTGTTTTATTGTTACAATATTGTTATGTGTGTTCTTGTTATATATTGAGGTTGTTCTAGCATCAGATTTTAAGCCCACAGATAAAATTCTGCTGAGTTGTGGTGGTCCTCCATCTAGCACTGATGCTGATGGAAGGGATTGGACCACTGATGTTGGTTCAAAATTTGAATCATCTTCGTCAGCCGGAAAAACCACGACATCATCGGCTGCAACTCAGGACCCTGCTGTCCCTGAGGTGCCATACATGACAGCCCGTGTGTTCCACTCAAAGTTCACCTACTCGATTCCGGTGGCCTCTGGTTGGAAATTCCTCAGGCTGTACTTTTACCCGGCTTCATACTCCGGCCTCAATGCATCCAACGCTTTGTTTGGTGTCACAGCGCAGCAATCATACACGTTGTTGAGGAACTTCAGCGTGGAGCAAACCACACTGGCCTTGAATTTTGCCTACATTGTGAAGGAGTATGCGATCCATGTCGAGGGGGAAACATTGAGTGTGACCTTTACTCCATCTGCCAATGCATCGAATTCATATGCATTTGTGAATGGGATTGAGGTGGTGTCTATGCCGGATATTTATACCTCTAGTGATGGTAGCAGTAGCACTATGATTGTTGCTACAAACTCTCCTTTTACTATTGATAACAGCACCATACTTGAGAATGTTTACAGGTTAAATGTCGGGGGGAATGATATCTCGCCGTCTCATGATACCGGTCTTTTTAGGTCATGGTCTGATGATATGCCTTACCTATTTGGTGCTGCATTTGGTGTTACCGAGCCGGCTGATCCATCTGTGAAGATCGAGTACCCTCCAGGCACACCGAGTTATATTGCTCCGAATGATGTTTACACTACAGCCAGATCAATGGGCCCAAACCCCCAAATAAACTTAAATTACAACCTGACTTGGCTTTTCACTATCGATTCAGGGTTTTCCTATCTCGTGAGGCTCCATTTCTGCGAGGGCTCGGCAAATATAACCAAGATCAATCAGAGGGTGTTCGACATTTTCCTCAATAATCAAACTGCTCAGCCTGGTGGTGCTGATGTTATAGCCTGGGCAGAGGGATCTGGGCTTTCACATAATAATGGTGTTCCAGTGCATAAAGATTATGTTGTATTTGTTCCTAATGGTGAACCACGGCAGGATTTGTGGCTTGCATTGAATCCAGATCAATCTTCGAAGCCACAGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAGATTAATGATACTACTGGTAGTCTTGCTGGGACAAATCCTATTGCTCCTCCTTTGCAAGAAAAGATTGACCCTTCATTGGCTCGGCCGCATCCTCATGCTAATTCGAAGAATCAGACAGGAGTGGTTGCTGGAGGTGTCAGTGGAGTAGTTGTTTTATTACTGCTTATCATTGGACTATTCACTTTTGCACGTCGACGTAGGCTTGGTAAAGACTCTAGTGCAATTGACGGTCCATCTGGCTGGCTTCCACTTTCTCTCTATGGTAATTCACACTCTGCAGGTTCTGCCAAGACTAACACCACAGGAAGTTATGCATCTTCGCTCCCATCAAACCTTTGCCGACACTTCTCATTCGCTGAAATCAAAGCTGCCACAAACAAATTCGACGATGCTTTAATTCTCGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGTGAAATCGATGGCGGAACAACCAAAGTTGCAATTAAGCGTGGGAATCCTCTATCCGACCAAGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAGCTTCGCCACCGTCACCTTGTTTCACTAATCGGCTACTGCGAAGAGAACACTGAGATGATTCTTGTTTATGATCACATGGCCTATGGAACACTCAGGGAGCATCTATACAAGACTCAGAACCCACCACTTCCATGGAGGCAAAGGCTTGAGATATGCATTGGAGCCGCTCGGGGTTTGCATTATCTTCACACCGGTGCTAAACACACGATCATCCACCGTGACGTGAAGACAACAAACATTTTACTAGACGAGAAGTGGGTGGCTAAGGTCTCTGATTTCGGATTGTCCAAAACAGGTCCAACATTGAATAACACGCATGTGAGTACTGTGGTGAAGGGTAGTTTCGGTTACTTGGATCCTGAATACTTCAGGAGGCAGCAACTTACTGACAAATCTGACGTGTACTCATTCGGAGTGGTTCTGTTTGAGATATTGTGCGCACGTCCAGCCTTGAATCCAACACTCGCTAAGGAGCAAGTGAGTCTAGCTGAGTGGGCGCCGCATTGTTATAAAAAGGGTATTCTAGATCAATTCATGGATCCTTATCTCAAGGGAAAGATAGCTCCGGAATGCTTTAAGAAATTTGCCGAGACAGCGATGAAGTGCGTGTCCGACGAAGGTATAGAGAGGCCTTCAATGGGTGATGTACTGTGGAACCTTGAGTTTGCATTGCAGCTGCAAGAAAGTGCTGAGGAGAGTGGCAAGGATTTTGTTGGGAAAAAGGTGCTGAATGAAGAAGAGCCATTGTTTATTGGCAATGATTGTAAAGAGAAGAACACTGATGCAAGTAATGTGAGTGATTTAATAAGCAGTGGAATGAGTATGAGCATTGGTGGTAGAAGCTTAGCAAGTGAAGATTCAGATGCATTGACACCTAGCACTGTGTTTTCTCAGATCATGAATCCAAAAGGACGTTAA 2721 0.4469 MRNNKNNNLNYCFIVTILLCVFLLYIEVVLASDFKPTDKILLSCGGPPSSTDADGRDWTTDVGSKFESSSSAGKTTTSSAATQDPAVPEVPYMTARVFHSKFTYSIPVASGWKFLRLYFYPASYSGLNASNALFGVTAQQSYTLLRNFSVEQTTLALNFAYIVKEYAIHVEGETLSVTFTPSANASNSYAFVNGIEVVSMPDIYTSSDGSSSTMIVATNSPFTIDNSTILENVYRLNVGGNDISPSHDTGLFRSWSDDMPYLFGAAFGVTEPADPSVKIEYPPGTPSYIAPNDVYTTARSMGPNPQINLNYNLTWLFTIDSGFSYLVRLHFCEGSANITKINQRVFDIFLNNQTAQPGGADVIAWAEGSGLSHNNGVPVHKDYVVFVPNGEPRQDLWLALNPDQSSKPQYYDAILNGVEIFKINDTTGSLAGTNPIAPPLQEKIDPSLARPHPHANSKNQTGVVAGGVSGVVVLLLLIIGLFTFARRRRLGKDSSAIDGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNKFDDALILGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLYKTQNPPLPWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLNNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAPHCYKKGILDQFMDPYLKGKIAPECFKKFAETAMKCVSDEGIERPSMGDVLWNLEFALQLQESAEESGKDFVGKKVLNEEEPLFIGNDCKEKNTDASNVSDLISSGMSMSIGGRSLASEDSDALTPSTVFSQIMNPKGR* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1202 906 PANTHER OS07G0166700 PROTEIN 24 867 IPR045272 GO:0004714|GO:0006468
Lan13g1202 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
Lan13g1202 906 ProSiteProfiles Protein kinase domain profile. 550 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1202 906 Gene3D Phosphorylase Kinase; domain 1 512 626 - -
Lan13g1202 906 SUPERFAMILY Protein kinase-like (PK-like) 525 823 IPR011009 -
Lan13g1202 906 Pfam Malectin-like domain 42 423 IPR024788 -
Lan13g1202 906 Gene3D Transferase(Phosphotransferase) domain 1 627 846 - -
Lan13g1202 906 SMART serkin_6 550 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g1202 906 Gene3D - 230 424 - -
Lan13g1202 906 Gene3D - 40 201 - -
Lan13g1202 906 CDD STKc_IRAK 556 822 - -
Lan13g1202 906 PANTHER - 24 867 - -
Lan13g1202 906 MobiDBLite consensus disorder prediction 62 82 - -
Lan13g1202 906 Pfam Protein tyrosine and serine/threonine kinase 556 818 IPR001245 GO:0004672|GO:0006468
Lan13g1202 906 ProSitePatterns Protein kinases ATP-binding region signature. 556 579 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1202 Lan-Chr13 17622956 17626463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g1202 28 906 Receptor kinase-like Gene Family AT3G51550 72.009 0.0 1276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan13g1202 Malectin_like 2.2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1202 - - lang:109325091 1792.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1424 7 19716658 19719601 Lan13g1202 13 17622956 17626463 LSH
Lan11g1648 11 32116811 32120093 Lan13g1202 13 17622956 17626463 LSH